RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	PCGF2	P35227	344 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	UCN	P55089	124 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	KLHL26	Q53HC5	615 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	CEACAM19	Q7Z692	300 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PNLDC1	Q8NA58	520 aa	Known RBP	13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TMEM239	Q8WW34	195 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TCTN2	Q96GX1	697 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	HS6ST2	Q96MM7	605 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	VNN3	Q9NY84	501 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TRAV27	A0A087WT01	109 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF208	O43345	1280 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	FZD6	O60353	706 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	CLU	P10909	449 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	BMP2	P12643	396 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	KIAA1024L	P59773	190 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ERVK-25	P63136	954 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ACVR1	Q04771	509 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	APOF	Q13790	326 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	MEDAG	Q5VYS4	303 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ABHD17C	Q6PCB6	329 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	KCTD18	Q6PI47	426 aa	Predicted RBP	13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TMEM151A	Q8N4L1	468 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SDR9C7	Q8NEX9	313 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PNPLA2	Q96AD5	504 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF717	Q9BY31	904 aa	Predicted RBP	13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	GLIPR2	Q9H4G4	154 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SIAE	Q9HAT2	523 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	B3GAT2	Q9NPZ5	323 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF879	B4DU55	563 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ADA	P00813	363 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SLC2A2	P11168	524 aa	Predicted RBP	13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PRKACB	P22694	351 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	NUBP1	P53384	320 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SERPINA11	Q86U17	422 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	LRRC20	Q8TCA0	184 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	DUSP19	Q8WTR2	217 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	LYSMD1	Q96S90	227 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	CENPO	Q9BU64	300 aa		13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	NAA50	Q9GZZ1	169 aa	Known RBP	13.37	□□□□□ -0.27
NEDD4L-238	ENST00000635997	KIAA1217	Q5T5P2	1943 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF878	C9JN71	531 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	AREL1	O15033	823 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	HR	O43593	1189 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PLRG1	O43660	514 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	FURIN	P09958	794 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	FTH1P19	P0C7X4	201 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SNU13	P55769	128 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PCBP4	P57723	403 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	CSRP2	Q16527	193 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TMEM150A	Q86TG1	271 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	MFSD9	Q8NBP5	474 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ADAMTS18	Q8TE60	1221 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TP63	Q9H3D4	680 aa	Predicted RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TRIP11	Q15643	1979 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	LRRC37A	A6NMS7	1700 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TLCD2	A6NGC4	264 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	FOXE1	O00358	373 aa	Predicted RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PDCD5	O14737	125 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	AP1G1	O43747	822 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	HYAL3	O43820	417 aa	Predicted RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	LCMT2	O60294	686 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ARRB2	P32121	409 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	CBX5	P45973	191 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF404	Q494X3	552 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PAPD4	Q6PIY7	484 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TECPR1	Q7Z6L1	1165 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ALDH16A1	Q8IZ83	802 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF619	Q8N2I2	560 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ASCC1	Q8N9N2	400 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	FGF11	Q92914	225 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	NUDT22	Q9BRQ3	303 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TMEM246	Q9BRR3	403 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	C1QTNF2	Q9BXJ5	285 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	C1GALT1	Q9NS00	363 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	C12orf71	A8MTZ7	269 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TPO	P07202	933 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	NR2C1	P13056	603 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	OPRL1	P41146	370 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	MAGEA12	P43365	314 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	GNG2	P59768	71 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SMN1	Q16637	294 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	MICA	Q29983	383 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	BCL7A	Q4VC05	210 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	MRPL2	Q5T653	305 aa	Known RBP	13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	PLEKHG7	Q6ZR37	379 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	IQCF2	Q8IXL9	164 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SAMD12	Q8N8I0	201 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	KIAA1958	Q8N8K9	716 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	TM4SF18	Q96CE8	201 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	RADIL	Q96JH8	1075 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	GINS4	Q9BRT9	223 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SP140L	Q9H930	580 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	DOPEY2	Q9Y3R5	2298 aa		13.36	□□□□□ -0.27
NEDD4L-238	ENST00000635997	OSM	P13725	252 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms