RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 RPS4Y1P22090 263 aaKnown RBP10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 UBE2IP63279 158 aaKnown RBP10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 POU6F2P78424 691 aaPredicted RBP10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SFSWAPQ12872 951 aaKnown RBP10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PYDC2Q56P42 97 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 EOGTQ5NDL2 527 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CD200R1LQ6Q8B3 271 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TMCO6Q96DC7 493 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ABHD8Q96I13 439 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TIMP4Q99727 224 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TTTY10Q9BZA0 68 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TWSG1Q9GZX9 223 aa10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NDRG2Q9UN36 371 aaKnown RBP10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 EXOGQ9Y2C4 368 aaKnown RBP10.92□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 B4DGG1 531 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TGFBR3LH3BV60 316 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CHST10O43529 356 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 AKAP8O43823 692 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 BRINP1O60477 761 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CCNKO75909 580 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IGKV1D-16P01601 117 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IGHA1P01876 353 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PAICSP22234 425 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 EMDP50402 254 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 YPEL5P62699 121 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MRPS21P82921 87 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PSG6Q00889 435 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 HHEXQ03014 270 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 KRR1Q13601 381 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 P2RY14Q15391 338 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FAM27D1Q5T7N8 215 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TMEM91Q6ZNR0 172 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 DEFB119Q8N690 84 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 METTL27Q8N6F8 245 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 DTX3Q8N9I9 347 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 OR10H4Q8NGA5 316 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 OR52L1Q8NGH7 329 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TOE1Q96GM8 510 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SMAD5Q99717 465 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SIAEQ9HAT2 523 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FLRT3Q9NZU0 649 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 A0A087WV62 115 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TRDV1A0A1B0GX56 115 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 E9PI62 339 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 DYRK3O43781 588 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NGFRP08138 427 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IL9P15248 144 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FGF9P31371 208 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FOXK2Q01167 660 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FAM53BQ14153 422 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NDUFAF6Q330K2 333 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 AGAP6Q5VW22 663 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NIPAL3Q6P499 406 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RNF44Q7L0R7 432 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 VWA5B2Q8N398 1253 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SLC37A3Q8NCC5 494 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TP53INP1Q96A56 240 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CTHRC1Q96CG8 243 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SENP5Q96HI0 755 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 AGAP4Q96P64 663 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 GPR174Q9BXC1 333 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PPIL3Q9H2H8 161 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 POT1Q9NUX5 634 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MED17Q9NVC6 651 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MN1Q10571 1320 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 LRRN3E7EW58 273 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 THEGLP0DJG4 465 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CTSEP14091 401 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MAP3K8P41279 467 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 HTR3AP46098 478 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FZD2Q14332 565 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 EXOSC6Q5RKV6 272 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ZNF362Q5T0B9 420 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PRPF38BQ5VTL8 546 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RSBN1Q5VWQ0 802 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NR2C2APQ86WQ0 139 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 GHDCQ8N2G8 530 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ACBD7Q8N6N7 88 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 BRIX1Q8TDN6 353 aaKnown RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PEX11GQ96HA9 241 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TNFRSF13CQ96RJ3 184 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ALG8Q9BVK2 526 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 C11orf54Q9H0W9 315 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 LRRN3Q9H3W5 708 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SIGLEC7Q9Y286 467 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ENTPD2Q9Y5L3 495 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RP1P56715 2156 aa10.91□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FRYLO94915 3013 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 A0A1B0GWA3 101 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SLC9B1P1A6NJY1 282 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SHISA7A6NL88 538 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 J3QRE1 110 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 POLR1CO15160 346 aaPredicted RBP10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MAGEB4O15481 346 aaPredicted RBP10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 HLA-DPB1P04440 258 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 HCCSP53701 268 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MAZP56270 477 aaKnown RBP10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 BTG2P78543 158 aa10.9□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 GPR50Q13585 617 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms