RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ISLR2Q6UXK2 745 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 ZBTB49Q6ZSB9 765 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 B4GALNT2Q8NHY0 566 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 ADAMTS16Q8TE57 1224 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
UPF1-206ENST00000598471 SH3YL1Q96HL8 342 aaPredicted RBP14.13□□□□□ -0.15
UPF1-206ENST00000598471 DHRS1Q96LJ7 313 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 CIB1Q99828 191 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 OSBPL10Q9BXB5 764 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 NMNAT1Q9HAN9 279 aaPredicted RBP14.13□□□□□ -0.15
UPF1-206ENST00000598471 NTN4Q9HB63 628 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 CPNE5Q9HCH3 593 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 TIMMDC1Q9NPL8 285 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 GPR83Q9NYM4 423 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 PPP4R1LQ9P1A2 415 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 RHCGQ9UBD6 479 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 WIF1Q9Y5W5 379 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 LYVE1Q9Y5Y7 322 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 CHCHD2Q9Y6H1 151 aaPredicted RBP14.13□□□□□ -0.15
UPF1-206ENST00000598471 U3KQV3 271 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 A0A1W2PRQ8 180 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 A6NL46 340 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 FAAHO00519 579 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 FFAR1O14842 300 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 NUDT14O95848 222 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 ITPKBP27987 946 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 RYKP34925 604 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 ACAA2P42765 397 aaKnown RBP14.12□□□□□ -0.15
UPF1-206ENST00000598471 P2RX1P51575 399 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 DGCR6Q14129 220 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 DCST1Q5T197 706 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 LRRC69Q6ZNQ3 347 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 STK32CQ86UX6 486 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 SPACA3Q8IXA5 215 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 CADM2Q8N3J6 435 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 LINC00471Q8N535 108 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 PACRGLQ8N7B6 248 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 LSMEM1Q8N8F7 131 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 OR52J3Q8NH60 311 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 OR5W2Q8NH69 310 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 ZNF563Q8TA94 476 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 DUSP19Q8WTR2 217 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 NRG4Q8WWG1 115 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 SLC38A4Q969I6 547 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 SLC41A3Q96GZ6 507 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 ALPK1Q96QP1 1244 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 CTPS2Q9NRF8 586 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 SACM1LQ9NTJ5 587 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 ACER3Q9NUN7 267 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 VNN3Q9NY84 501 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 CNOT11Q9UKZ1 510 aaKnown RBP14.12□□□□□ -0.15
UPF1-206ENST00000598471 RAXQ9Y2V3 346 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 EXPH5Q8NEV8 1989 aa14.12□□□□□ -0.15
UPF1-206ENST00000598471 AKAP13Q12802 2813 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 ANKRD33BA6NCL7 494 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 FAM47E-STBD1D6RA91 191 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 OIP5O43482 229 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 TPST2O60704 377 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 SEMA7AO75326 666 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 CCNB2O95067 398 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 SNX4O95219 450 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 HTR2AP28223 471 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 EIF2S3P41091 472 aaKnown RBP14.11□□□□□ -0.15
UPF1-206ENST00000598471 CCL11P51671 97 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 HMGA2P52926 109 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 IST1P53990 364 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 GAS1P54826 345 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 UCNP55089 124 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 MFAP5Q13361 173 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 EXOC3L2Q2M3D2 409 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 SWT1Q5T5J6 900 aaKnown RBP14.11□□□□□ -0.15
UPF1-206ENST00000598471 PRAMEF20Q5VT98 475 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 WBP2NLQ6ICG8 309 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 CBLN3Q6UW01 205 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 LINC00696Q6ZRV3 163 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 APLFQ8IW19 511 aaPredicted RBP14.11□□□□□ -0.15
UPF1-206ENST00000598471 WDFY3Q8IZQ1 3526 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 CBR4Q8N4T8 237 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 OR4C15Q8NGM1 316 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 RNF217Q8TC41 542 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 GIPC3Q8TF64 312 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 DNAJA4Q8WW22 397 aaPredicted RBP14.11□□□□□ -0.15
UPF1-206ENST00000598471 DTNBP1Q96EV8 351 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 PRR14Q9BWN1 585 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 ANGPTL4Q9BY76 406 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 RNF32Q9H0A6 362 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 GALNT9Q9HCQ5 603 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 SH2D2AQ9NP31 389 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 LRFN1Q9P244 771 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 KIF17Q9P2E2 1029 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 ZMIZ1Q9ULJ6 1067 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
UPF1-206ENST00000598471 IGLV3-32A0A0A0MS00 114 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 A0A1B0GWA3 101 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 TMEM8BA6NDV4 472 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 ANKUB1A6NFN9 424 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 CHP2O43745 196 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 RASAL1O95294 804 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 HPRP00739 348 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 CCL3P10147 92 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms