RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PDE7AQ13946 482 aa8.82□□□□□ -1
LIG1-209ENST00000596104 TOMM34Q15785 309 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 NRF1Q16656 503 aa8.82□□□□□ -1
LIG1-209ENST00000596104 KRTAP24-1Q3LI83 254 aa8.82□□□□□ -1
LIG1-209ENST00000596104 TMEM176BQ3YBM2 270 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 C11orf71Q6IPW1 123 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ZCCHC12Q6PEW1 402 aa8.82□□□□□ -1
LIG1-209ENST00000596104 SLC43A2Q8N370 569 aa8.82□□□□□ -1
LIG1-209ENST00000596104 C17orf53Q8N3J3 647 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 CCNYL1Q8N7R7 359 aa8.82□□□□□ -1
LIG1-209ENST00000596104 COX18Q8N8Q8 333 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ZFP28Q8NHY6 868 aa8.82□□□□□ -1
LIG1-209ENST00000596104 FBXO27Q8NI29 283 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ZFP90Q8TF47 636 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ZNF524Q96C55 264 aa8.82□□□□□ -1
LIG1-209ENST00000596104 PSD2Q9BQI7 771 aa8.82□□□□□ -1
LIG1-209ENST00000596104 RHNO1Q9BSD3 238 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ALG2Q9H553 416 aa8.82□□□□□ -1
LIG1-209ENST00000596104 REEP4Q9H6H4 257 aa8.82□□□□□ -1
LIG1-209ENST00000596104 RRAGDQ9NQL2 400 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 SIRT3Q9NTG7 399 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 ACSS1Q9NUB1 689 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 TMEM160Q9NX00 188 aa8.82□□□□□ -1
LIG1-209ENST00000596104 PRSS50Q9UI38 385 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ICAM5Q9UMF0 924 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ACTL7BQ9Y614 415 aa8.82□□□□□ -1
LIG1-209ENST00000596104 IGHV3-15A0A0B4J1V0 119 aa8.81□□□□□ -1
LIG1-209ENST00000596104 FAM234BA2RU67 622 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ELOA3DA6NLF2 546 aaPredicted RBP8.81□□□□□ -1
LIG1-209ENST00000596104 GJE1A6NN92 205 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ABCD4O14678 606 aa8.81□□□□□ -1
LIG1-209ENST00000596104 RGS14O43566 566 aa8.81□□□□□ -1
LIG1-209ENST00000596104 SEC22BO75396 215 aa8.81□□□□□ -1
LIG1-209ENST00000596104 PGM3O95394 542 aa8.81□□□□□ -1
LIG1-209ENST00000596104 HSPA4LO95757 839 aa8.81□□□□□ -1
LIG1-209ENST00000596104 GSTA1P08263 222 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ABHD2P08910 425 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ALOX5P09917 674 aa8.81□□□□□ -1
LIG1-209ENST00000596104 PRKCAP17252 672 aa8.81□□□□□ -1
LIG1-209ENST00000596104 SDC1P18827 310 aa8.81□□□□□ -1
LIG1-209ENST00000596104 SERPINB4P48594 390 aa8.81□□□□□ -1
LIG1-209ENST00000596104 P2RX1P51575 399 aa8.81□□□□□ -1
LIG1-209ENST00000596104 NUDT6P53370 316 aa8.81□□□□□ -1
LIG1-209ENST00000596104 SUMO3P55854 103 aaPredicted RBP8.81□□□□□ -1
LIG1-209ENST00000596104 RAC3P60763 192 aa8.81□□□□□ -1
LIG1-209ENST00000596104 PPA1Q15181 289 aa8.81□□□□□ -1
LIG1-209ENST00000596104 STK11Q15831 433 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ELOA3BQ3SY89 546 aa8.81□□□□□ -1
LIG1-209ENST00000596104 KLHL26Q53HC5 615 aa8.81□□□□□ -1
LIG1-209ENST00000596104 SLC25A53Q5H9E4 307 aa8.81□□□□□ -1
LIG1-209ENST00000596104 TIMM23BQ5SRD1 257 aa8.81□□□□□ -1
LIG1-209ENST00000596104 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.81□□□□□ -1
LIG1-209ENST00000596104 AGAP6Q5VW22 663 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ZYG11AQ6WRX3 759 aa8.81□□□□□ -1
LIG1-209ENST00000596104 FRMD7Q6ZUT3 714 aa8.81□□□□□ -1
LIG1-209ENST00000596104 SZRD1Q7Z422 152 aa8.81□□□□□ -1
LIG1-209ENST00000596104 MTERF4Q7Z6M4 381 aaKnown RBP8.81□□□□□ -1
LIG1-209ENST00000596104 ELOA3Q8NG57 546 aa8.81□□□□□ -1
LIG1-209ENST00000596104 PHOSPHO1Q8TCT1 267 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ACMSDQ8TDX5 336 aa8.81□□□□□ -1
LIG1-209ENST00000596104 MZB1Q8WU39 189 aa8.81□□□□□ -1
LIG1-209ENST00000596104 ZNF75CPQ92670 426 aaPredicted RBP8.81□□□□□ -1
LIG1-209ENST00000596104 PPCDCQ96CD2 204 aa8.81□□□□□ -1
LIG1-209ENST00000596104 FAM120BQ96EK7 910 aaKnown RBP8.81□□□□□ -1
LIG1-209ENST00000596104 TNFRSF13CQ96RJ3 184 aa8.81□□□□□ -1
LIG1-209ENST00000596104 CCT7Q99832 543 aa8.81□□□□□ -1
LIG1-209ENST00000596104 BTBD2Q9BX70 525 aa8.81□□□□□ -1
LIG1-209ENST00000596104 CACNG6Q9BXT2 260 aa8.81□□□□□ -1
LIG1-209ENST00000596104 IQCGQ9H095 443 aaKnown RBP8.81□□□□□ -1
LIG1-209ENST00000596104 L2HGDHQ9H9P8 463 aa8.81□□□□□ -1
LIG1-209ENST00000596104 DUSP22Q9NRW4 184 aa8.81□□□□□ -1
LIG1-209ENST00000596104 FAIMQ9NVQ4 179 aa8.81□□□□□ -1
LIG1-209ENST00000596104 GIN1Q9NXP7 522 aa8.81□□□□□ -1
LIG1-209ENST00000596104 KLHL9Q9P2J3 617 aa8.81□□□□□ -1
LIG1-209ENST00000596104 PTGDR2Q9Y5Y4 395 aa8.81□□□□□ -1
LIG1-209ENST00000596104 GPC6Q9Y625 555 aaPredicted RBP8.81□□□□□ -1
LIG1-209ENST00000596104 NPIPA5A0A0B4J1W7 369 aa8.8□□□□□ -1
LIG1-209ENST00000596104 A0A1W2PNR3 127 aa8.8□□□□□ -1
LIG1-209ENST00000596104 OR5H1A6NKK0 313 aa8.8□□□□□ -1
LIG1-209ENST00000596104 E7EQL1 145 aa8.8□□□□□ -1
LIG1-209ENST00000596104 NPIPA7E9PJI5 369 aa8.8□□□□□ -1
LIG1-209ENST00000596104 NPIPB9F8W1W9 429 aa8.8□□□□□ -1
LIG1-209ENST00000596104 ETV2O00321 342 aaPredicted RBP8.8□□□□□ -1
LIG1-209ENST00000596104 SMAD9O15198 467 aaKnown RBP8.8□□□□□ -1
LIG1-209ENST00000596104 AKAP10O43572 662 aa8.8□□□□□ -1
LIG1-209ENST00000596104 CYTIPO60759 359 aa8.8□□□□□ -1
LIG1-209ENST00000596104 HMGN2P05204 90 aaKnown RBP8.8□□□□□ -1
LIG1-209ENST00000596104 C8BP07358 591 aa8.8□□□□□ -1
LIG1-209ENST00000596104 NPIPA8P0DM63 369 aa8.8□□□□□ -1
LIG1-209ENST00000596104 UROSP10746 265 aa8.8□□□□□ -1
LIG1-209ENST00000596104 PYGBP11216 843 aa8.8□□□□□ -1
LIG1-209ENST00000596104 EFNA1P20827 205 aaPredicted RBP8.8□□□□□ -1
LIG1-209ENST00000596104 IGHV1-2P23083 117 aa8.8□□□□□ -1
LIG1-209ENST00000596104 TTKP33981 857 aa8.8□□□□□ -1
LIG1-209ENST00000596104 RNF144AP50876 292 aaPredicted RBP8.8□□□□□ -1
LIG1-209ENST00000596104 DSCR9P59020 149 aa8.8□□□□□ -1
LIG1-209ENST00000596104 POU6F2P78424 691 aaPredicted RBP8.8□□□□□ -1
LIG1-209ENST00000596104 SELENBP1Q13228 472 aa8.8□□□□□ -1
LIG1-209ENST00000596104 LASP1Q14847 261 aaKnown RBP8.8□□□□□ -1
LIG1-209ENST00000596104 NDUFAF6Q330K2 333 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms