RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MAPK14Q16539 360 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 GPR139Q6DWJ6 353 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 LYPD4Q6UWN0 246 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 IL20RBQ6UXL0 311 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 SPERTQ8NA61 448 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 MAP6Q96JE9 813 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PGLYRP3Q96LB9 341 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TEAD3Q99594 435 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TRMT61BQ9BVS5 477 aaKnown RBP12.3□□□□□ -0.44
VRK3-209ENST00000594948 CACNG6Q9BXT2 260 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TMEM168Q9H0V1 697 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 LRRN3Q9H3W5 708 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 EQTNQ9NQ60 294 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 CENPFP49454 3210 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TPD52L2O43399 206 aaKnown RBP12.3□□□□□ -0.44
VRK3-209ENST00000594948 TSC22D2O75157 780 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 STX11O75558 287 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 LYPD3O95274 346 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 SBK2P0C263 348 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 H2AFB2P0C5Z0 115 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
VRK3-209ENST00000594948 OR10A3P58181 314 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 ZNF85Q03923 595 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 KRT74Q7RTS7 529 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 SIAH3Q8IW03 269 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 OR10H4Q8NGA5 316 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 OR56B4Q8NH76 319 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TMEM239Q8WW34 195 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PMM1Q92871 262 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 C10orf90Q96M02 699 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 IL20RAQ9UHF4 553 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 ZMIZ1Q9ULJ6 1067 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 SLC35A3Q9Y2D2 325 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TRPM6Q9BX84 2022 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 E9PI62 339 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 AGRPO00253 132 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 GPR171O14626 319 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 OGG1O15527 345 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 PRAF2O60831 178 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 RNGTTO60942 597 aaKnown RBP12.29□□□□□ -0.44
VRK3-209ENST00000594948 DBIP07108 87 aaKnown RBP12.29□□□□□ -0.44
VRK3-209ENST00000594948 ASGR2P07307 311 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 HNRNPA1P09651 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
VRK3-209ENST00000594948 LINC00271P0C7V0 271 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 IFI30P13284 250 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 TYRP1P17643 537 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 CMPK1P30085 196 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 FOXK2Q01167 660 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 ACSM3Q53FZ2 586 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 TCEAL5Q5H9L2 206 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 ZNF425Q6IV72 752 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 TIGD4Q8IY51 512 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 CDK20Q8IZL9 346 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 OR2L13Q8N349 312 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 OR2L3Q8NG85 312 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 CDS1Q92903 461 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 PTP4A1Q93096 173 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 GAL3ST3Q96A11 431 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 NXPE2Q96DL1 559 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 ART5Q96L15 291 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 LRFN5Q96NI6 719 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 LGR4Q9BXB1 951 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 DPH1Q9BZG8 443 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 CLEC4MQ9H2X3 399 aaPredicted RBP12.29□□□□□ -0.44
VRK3-209ENST00000594948 PLEKHA1Q9HB21 404 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 ADGRL4Q9HBW9 690 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 MAT2BQ9NZL9 334 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 APOBEC3BQ9UH17 382 aaKnown RBP12.29□□□□□ -0.44
VRK3-209ENST00000594948 HCFC2Q9Y5Z7 792 aa12.29□□□□□ -0.44
VRK3-209ENST00000594948 RPS10-NUDT3A0A1W2PQS6 291 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 A0A1W2PS29 197 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 GATBO75879 557 aaKnown RBP12.28□□□□□ -0.44
VRK3-209ENST00000594948 ARL6IP5O75915 188 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 MAKP20794 623 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 GIFP27352 417 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 E2F1Q01094 437 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 SLC3A1Q07837 685 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 KLF9Q13886 244 aaPredicted RBP12.28□□□□□ -0.44
VRK3-209ENST00000594948 ZNF234Q14588 700 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 SLC25A35Q3KQZ1 300 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 EXOSC6Q5RKV6 272 aaKnown RBP12.28□□□□□ -0.44
VRK3-209ENST00000594948 FAM69AQ5T7M9 428 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 FAM111BQ6SJ93 734 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 OVCH1Q7RTY7 1134 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 ZNF619Q8N2I2 560 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 LRRC25Q8N386 305 aaPredicted RBP12.28□□□□□ -0.44
VRK3-209ENST00000594948 FAM98AQ8NCA5 519 aaKnown RBP12.28□□□□□ -0.44
VRK3-209ENST00000594948 SLC16A11Q8NCK7 471 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 PHYHIPQ92561 330 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 KAT2AQ92830 837 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 NACC2Q96BF6 587 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 LCORQ96JN0 433 aaPredicted RBP12.28□□□□□ -0.44
VRK3-209ENST00000594948 C4orf36Q96KX1 117 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 SDF2Q99470 211 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms