RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ZNF117Q03924 483 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 NRF1Q16656 503 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 PGGHGQ32M88 737 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 TMEM176BQ3YBM2 270 aaPredicted RBP12.42□□□□□ -0.42
VMP1-209ENST00000588915 SLC25A53Q5H9E4 307 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 ANKRD26P1Q6NSI1 321 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 HMBOX1Q6NT76 420 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 SZRD1Q7Z422 152 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 DTX2Q86UW9 622 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 P2RY8Q86VZ1 359 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 NATD1Q8N6N6 113 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 BANPQ8N9N5 519 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 FBXO27Q8NI29 283 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 ZFP90Q8TF47 636 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 ARL8AQ96BM9 186 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 FAM120BQ96EK7 910 aaKnown RBP12.42□□□□□ -0.42
VMP1-209ENST00000588915 C16orf58Q96GQ5 468 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 RADILQ96JH8 1075 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 TRMOQ9BU70 441 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 SRXN1Q9BYN0 137 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 TRIM2Q9C040 744 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 ALG2Q9H553 416 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 KLHL9Q9P2J3 617 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 ICAM5Q9UMF0 924 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 MAGED1Q9Y5V3 778 aaPredicted RBP12.42□□□□□ -0.42
VMP1-209ENST00000588915 DPRXA6NFQ7 191 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 ZNF814B7Z6K7 855 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 ETV2O00321 342 aaPredicted RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 AZIN1O14977 448 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 AKAP10O43572 662 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 PLIN3O60664 434 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 NTN1O95631 604 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 CHEK2O96017 543 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 HMGN2P05204 90 aaKnown RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 FGF4P08620 206 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 KRT16P08779 473 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 CPA3P15088 417 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 SHC1P29353 583 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 ACVR1BP36896 505 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 CDKN1AP38936 164 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 OR3A2P47893 321 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 BSPH1Q075Z2 132 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 FOXF1Q12946 379 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 RFTN2Q52LD8 501 aaPredicted RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 KLHL26Q53HC5 615 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 FREM1Q5H8C1 2179 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 ALKBH2Q6NS38 261 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 CDC73Q6P1J9 531 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 SEZ6L2Q6UXD5 910 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 BHLHA15Q7RTS1 189 aaPredicted RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 IFT20Q8IY31 132 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 MAPK1IP1LQ8NDC0 245 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 PSMA8Q8TAA3 256 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 FBXO30Q8TB52 745 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 GPR119Q8TDV5 335 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 TRAF4Q9BUZ4 470 aaPredicted RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 COQ10BQ9H8M1 238 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 TNFRSF12AQ9NP84 129 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 SIRT3Q9NTG7 399 aaPredicted RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 ZCCHC3Q9NUD5 404 aaKnown RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 CISD1Q9NZ45 108 aaKnown RBP12.41□□□□□ -0.42
VMP1-209ENST00000588915 TBK1Q9UHD2 729 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 CADP27708 2225 aa12.41□□□□□ -0.42
VMP1-209ENST00000588915 GOLGA8QA0A0J9YX86 632 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 A0A1W2PPM1 405 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 GOLGA8OA6NCC3 632 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 ZNF724A8MTY0 619 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 GOLGA8NF8WBI6 632 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 PGM3O95394 542 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 NUDT14O95848 222 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 IGHV4-39P01824 125 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 PRKCAP17252 672 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 ATP12AP54707 1039 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 DSCR9P59020 149 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 SELENBP1Q13228 472 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 LASP1Q14847 261 aaKnown RBP12.4□□□□□ -0.42
VMP1-209ENST00000588915 PPA1Q15181 289 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 TSC22D1Q15714 1073 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 TIMM23BQ5SRD1 257 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 CCNJQ5T5M9 372 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 AGAP6Q5VW22 663 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 LIPMQ5VYY2 423 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 CLEC6AQ6EIG7 209 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 CEP112Q8N8E3 955 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 TOR1AIP2Q8NFQ8 470 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 OR56A1Q8NGH5 318 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 OR2T11Q8NH01 316 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 ADAMTS15Q8TE58 950 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 JADE3Q92613 823 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 MUCL1Q96DR8 90 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 HS6ST2Q96MM7 605 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 KLHDC3Q9BQ90 382 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 PSD2Q9BQI7 771 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 ACTRT3Q9BYD9 372 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 TXLNGYQ9BZA5 131 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 PPCSQ9HAB8 311 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 BAIAP2L1Q9UHR4 511 aa12.4□□□□□ -0.42
VMP1-209ENST00000588915 ATP6V1HQ9UI12 483 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms