RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 FAAH2Q6GMR7 532 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 RHBDD2Q6NTF9 364 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 PWWP2BQ6NUJ5 590 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SLC23A3Q6PIS1 610 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 BRICD5Q6PL45 260 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 WDR88Q6ZMY6 472 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SHISA6Q6ZSJ9 500 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 RASSF6Q6ZTQ3 369 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 STX19Q8N4C7 294 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 TCEANCQ8N8B7 351 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 C7orf57Q8NEG2 295 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 GRHL3Q8TE85 626 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF721Q8TF20 911 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 EFHD2Q96C19 240 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 C12orf43Q96C57 262 aaKnown RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ARSGQ96EG1 525 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ART5Q96L15 291 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 Q96MT0 163 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 COG8Q96MW5 612 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SLC46A1Q96NT5 459 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 GAL3ST4Q96RP7 486 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 LMF1Q96S06 567 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 PLA2G12AQ9BZM1 189 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 NAA50Q9GZZ1 169 aaKnown RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SMOC1Q9H4F8 434 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 LIN28AQ9H9Z2 209 aaKnown RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 AMBNQ9NP70 447 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 FKBP14Q9NWM8 211 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 GPR83Q9NYM4 423 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 TVP23BQ9NYZ1 205 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 DNAJC27Q9NZQ0 273 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SELENONQ9NZV5 590 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 CFL2Q9Y281 166 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 PCDHGB1Q9Y5G3 927 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 GCN1Q92616 2671 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 A0A1B0GWA3 101 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 FRG2CA6NGY1 282 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 SERINC4A6NH21 518 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 UNC119BA6NIH7 251 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 EFCAB7A8K855 629 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 KPNA4O00629 521 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 POLR1CO15160 346 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 KLF4O43474 513 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 AHCYL1O43865 530 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 PRKYO43930 277 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 TRMUO75648 421 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 UTS2O95399 124 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 TIAF1O95411 115 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 CSTAP01040 98 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 IGKV3-11P04433 115 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 HEXBP07686 556 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 STSP08842 583 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 IFI30P13284 250 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 PPICP45877 212 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 PCYT1AP49585 367 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 SH3BGRP55822 239 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 CDK5Q00535 292 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 OCA2Q04671 838 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 CLPPQ16740 277 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 NDUFAF6Q330K2 333 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF528Q3MIS6 628 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 NKAIN1Q4KMZ8 207 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 TMEM201Q5SNT2 666 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF613Q6PF04 617 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 LANCL3Q6ZV70 420 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF550Q7Z398 422 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 LSRQ86X29 649 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 GRAMD2AQ8IUY3 354 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 ERI1Q8IV48 349 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 CMIPQ8IY22 773 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 ALDH16A1Q8IZ83 802 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 CADM2Q8N3J6 435 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF527Q8NB42 609 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 POGLUT1Q8NBL1 392 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 PLPP5Q8NEB5 264 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 B3GNT7Q8NFL0 401 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 OR8D4Q8NGM9 314 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 PFN4Q8NHR9 129 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 TMEM239Q8WW34 195 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 TRUB1Q8WWH5 349 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 FCGR1BQ92637 280 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 OSTF1Q92882 214 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 DAZLQ92904 295 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 LCORQ96JN0 433 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 SLC38A2Q96QD8 506 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 DOK1Q99704 481 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 PRSS27Q9BQR3 290 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 TSSK6Q9BXA6 273 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 POLDIP3Q9BY77 421 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 TRIM2Q9C040 744 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 HOXD1Q9GZZ0 328 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 NXF5Q9H1B4 397 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 ACOT13Q9NPJ3 140 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 SLC22A11Q9NSA0 550 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 SIDT1Q9NXL6 827 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 CNOT2Q9NZN8 540 aaKnown RBP8.07□□□□□ -1.12
SMAD4-206ENST00000588860 FLRT3Q9NZU0 649 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 RPS6KB2Q9UBS0 482 aa8.07□□□□□ -1.12
SMAD4-206ENST00000588860 COPS7AQ9UBW8 275 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms