RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 YTHDF3Q7Z739 585 aaKnown RBP12.34□□□□□ -0.43
NDE1-209ENST00000574109 SIAH3Q8IW03 269 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 OR52E4Q8NGH9 312 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 CPT1CQ8TCG5 803 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 FIG4Q92562 907 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 PROX1Q92786 737 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 FAM162AQ96A26 154 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
NDE1-209ENST00000574109 SNRNP40Q96DI7 357 aaKnown RBP12.34□□□□□ -0.43
NDE1-209ENST00000574109 GPR137Q96N19 417 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 TRIM15Q9C019 465 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 TESQ9UGI8 421 aaKnown RBP12.34□□□□□ -0.43
NDE1-209ENST00000574109 ICAM5Q9UMF0 924 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 SAMD4AQ9UPU9 718 aaKnown RBP12.34□□□□□ -0.43
NDE1-209ENST00000574109 CARD8Q9Y2G2 431 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 MPDZO75970 2070 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 KIAA1549Q9HCM3 1950 aa12.34□□□□□ -0.43
NDE1-209ENST00000574109 OR14I1A6ND48 311 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 CFAP73A6NFT4 308 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 B8ZZF3 427 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 HOXB6P17509 224 aaKnown RBP12.33□□□□□ -0.44
NDE1-209ENST00000574109 ADH6P28332 368 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 RFC3P40938 356 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 RBPJQ06330 500 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 TOMM20Q15388 145 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 ARHGAP11AQ6P4F7 1023 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 AAGABQ6PD74 315 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 OLIG3Q7RTU3 272 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
NDE1-209ENST00000574109 VRK2Q86Y07 508 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 CISD2Q8N5K1 135 aaKnown RBP12.33□□□□□ -0.44
NDE1-209ENST00000574109 FAM83FQ8NEG4 500 aaPredicted RBP12.33□□□□□ -0.44
NDE1-209ENST00000574109 TAMM41Q96BW9 452 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 ZG16BQ96DA0 208 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 ASB9Q96DX5 294 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 SH3YL1Q96HL8 342 aaPredicted RBP12.33□□□□□ -0.44
NDE1-209ENST00000574109 GNRHR2Q96P88 292 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 BBC3Q96PG8 261 aaPredicted RBP12.33□□□□□ -0.44
NDE1-209ENST00000574109 PIGQQ9BRB3 760 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 RTN4RQ9BZR6 473 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 DSN1Q9H410 356 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 GORASP2Q9H8Y8 452 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 TAS2R10Q9NYW0 307 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 MED11Q9P086 117 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 ACTR3BQ9P1U1 418 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 FBXL2Q9UKC9 423 aa12.33□□□□□ -0.44
NDE1-209ENST00000574109 A0A1B0GVC2 190 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 M0QX08 132 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 ETV2O00321 342 aaPredicted RBP12.32□□□□□ -0.44
NDE1-209ENST00000574109 AQP7O14520 342 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 ARPC2O15144 300 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 FMO6PO60774 539 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 CYP7B1O75881 506 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 LINGO3P0C6S8 592 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 CHMP24386 653 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 HTR3AP46098 478 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 KCNJ5P48544 419 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 TDGF1P3P51864 188 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 MAP2K6P52564 334 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 DLX5P56178 289 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 RGS8P57771 180 aaPredicted RBP12.32□□□□□ -0.44
NDE1-209ENST00000574109 COPZ1P61923 177 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 DMTNQ08495 405 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 EPS8Q12929 822 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 CEACAM7Q14002 265 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.443e-6■■■□□ 15.4
NDE1-209ENST00000574109 PLPPR5Q32ZL2 321 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 SOWAHCQ53LP3 525 aaPredicted RBP12.32□□□□□ -0.44
NDE1-209ENST00000574109 CMPK2Q5EBM0 449 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 RAET1LQ5VY80 246 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 OR5M10Q6IEU7 315 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 ST6GALNAC3Q8NDV1 305 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 OR14L1PQ8NHC6 308 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 NEIL3Q8TAT5 605 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 MRGPRX4Q96LA9 322 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 THTPAQ9BU02 230 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 POLR2J2Q9GZM3 115 aaKnown RBP12.32□□□□□ -0.44
NDE1-209ENST00000574109 POLR2J3Q9H1A7 115 aaKnown RBP12.32□□□□□ -0.44
NDE1-209ENST00000574109 LDAHQ9H6V9 325 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 MED17Q9NVC6 651 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 ASF1BQ9NVP2 202 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 NBASA2RRP1 2371 aa12.32□□□□□ -0.44
NDE1-209ENST00000574109 SPENQ96T58 3664 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 TRGV5A0A0B4J1U4 118 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 C2orf72A6NCS6 295 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 CDC40O60508 579 aaKnown RBP eCLIP12.31□□□□□ -0.44
NDE1-209ENST00000574109 TRAPPC6AO75865 159 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 LGI1O95970 557 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 ACTL6AO96019 429 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 OPN1SWP03999 348 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 RFPL3SP0C7P2 107 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 HK1P19367 917 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 TCN1P20061 433 aaPredicted RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 CD247P20963 164 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 FKBP2P26885 142 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 SELENOWP63302 87 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms