RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 RASGRP1O95267 797 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 NT5EP21589 574 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 FOXK2Q01167 660 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 GALEQ14376 348 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 CDK10Q15131 360 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 FIGNL1Q6PIW4 674 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 GLCCI1Q86VQ1 547 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 BPIFA2Q96DR5 249 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 ZFYVE21Q9BQ24 234 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 TTYH2Q9BSA4 534 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 FBRSQ9HAH7 460 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 SIGLEC7Q9Y286 467 aa21.11■□□□□ 0.97
VPS53-211ENST00000571805 HRO43593 1189 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 SLC19A2O60779 497 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 RCBTB2O95199 551 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 GPR75O95800 540 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 LSSP48449 732 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 CTBP2P56545 445 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 EXOSC7Q15024 291 aaKnown RBP21.1■□□□□ 0.97
VPS53-211ENST00000571805 ZCCHC12Q6PEW1 402 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 PLET1Q6UQ28 207 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 OR5T3Q8NGG3 340 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 OR13C2Q8NGS9 318 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 FAM3CQ92520 227 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 SIPA1Q96FS4 1042 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 AHCYL2Q96HN2 611 aaKnown RBP21.1■□□□□ 0.97
VPS53-211ENST00000571805 TEAD3Q99594 435 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 PPIL3Q9H2H8 161 aaKnown RBP21.1■□□□□ 0.97
VPS53-211ENST00000571805 EVA1BQ9NVM1 165 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 MAT2BQ9NZL9 334 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 DAPL1A0PJW8 107 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 KLF8O95600 359 aaPredicted RBP21.1■□□□□ 0.97
VPS53-211ENST00000571805 CT62P0C5K7 136 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 ELK1P19419 428 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 MRPS15P82914 257 aaKnown RBP21.1■□□□□ 0.97
VPS53-211ENST00000571805 ACOT12Q8WYK0 555 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 ARSGQ96EG1 525 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 KCNN2Q9H2S1 579 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 MEPEQ9NQ76 525 aaPredicted RBP21.1■□□□□ 0.97
VPS53-211ENST00000571805 F5P12259 2224 aa21.1■□□□□ 0.97
VPS53-211ENST00000571805 GXYLT2A0PJZ3 443 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 LYRM1O43325 122 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 PTP4A3O75365 173 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 REM1O75628 298 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 CHRNB1P11230 501 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 PVRP15151 417 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 IL9P15248 144 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 KLHL12Q53G59 568 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 C9orf50Q5SZB4 431 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 RPL13AP3Q6NVV1 102 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 MZT2BQ6NZ67 158 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 OR5W2Q8NH69 310 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 UBASH3BQ8TF42 649 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 IFT27Q9BW83 186 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 SCML1Q9UN30 329 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 BOLA1Q9Y3E2 137 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 FAM86C2PA6NEL3 165 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 E9PI62 339 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 SGK494L7N484 410 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 BRINP1O60477 761 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 RFPL3O75679 317 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 PRKAR1AP10644 381 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 ALAS2P22557 587 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 AMZ1Q400G9 498 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 ZAR1Q86SH2 424 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 UBL7Q96S82 380 aaPredicted RBP21.09■□□□□ 0.97
VPS53-211ENST00000571805 ADAM30Q9UKF2 790 aa21.09■□□□□ 0.97
VPS53-211ENST00000571805 PRR23D1E9PI22 279 aaPredicted RBP21.08■□□□□ 0.97
VPS53-211ENST00000571805 PRR23D2P0DMB1 279 aaPredicted RBP21.08■□□□□ 0.97
VPS53-211ENST00000571805 PSKH1P11801 424 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 GABRA3P34903 492 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 RACK1P63244 317 aaKnown RBP21.08■□□□□ 0.97
VPS53-211ENST00000571805 TATDN3Q17R31 274 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 NOXA1Q86UR1 476 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 CDK20Q8IZL9 346 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 OR10H4Q8NGA5 316 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 RSC1A1Q92681 617 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 RERGQ96A58 199 aaPredicted RBP21.08■□□□□ 0.97
VPS53-211ENST00000571805 CTHRC1Q96CG8 243 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 CDCA3Q99618 268 aaPredicted RBP21.08■□□□□ 0.97
VPS53-211ENST00000571805 BEX2Q9BXY8 128 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 TRIM36Q9NQ86 728 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 INPP5EQ9NRR6 644 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 TMEM5Q9Y2B1 443 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 MED31Q9Y3C7 131 aa21.08■□□□□ 0.97
VPS53-211ENST00000571805 SLC22A31A6NKX4 558 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 TNFRSF10CO14798 259 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 EGFP01133 1207 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 DRD5P21918 477 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 SHC1P29353 583 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 NOS3P29474 1203 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 ACSL1P33121 698 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 BMP8BP34820 402 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 SHC2P98077 582 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 IDNKQ5T6J7 187 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 BMP8AQ7Z5Y6 402 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 ASCC1Q8N9N2 400 aaKnown RBP21.08■□□□□ 0.96
VPS53-211ENST00000571805 BAHD1Q8TBE0 780 aaPredicted RBP21.08■□□□□ 0.96
VPS53-211ENST00000571805 PMM1Q92871 262 aa21.08■□□□□ 0.96
VPS53-211ENST00000571805 NCKAP1Q9Y2A7 1128 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms