RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 DND1Q8IYX4 353 aaKnown RBP27.97■■■□□ 2.07
CTCF-203ENST00000566078 CLEC1AQ8NC01 280 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 SLC7A13Q8TCU3 470 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 RNF138Q8WVD3 245 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 PSMF1Q92530 271 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 TRIM2Q9C040 744 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 TMEM27Q9HBJ8 222 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 SLC7A7Q9UM01 511 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 SPTBN4Q9H254 2564 aa27.97■■■□□ 2.07
CTCF-203ENST00000566078 C7orf72A4D263 438 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 TP53I11O14683 189 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 NKX2-8O15522 239 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 THY1P04216 161 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 WT1P19544 449 aaPredicted RBP27.96■■■□□ 2.07
CTCF-203ENST00000566078 SEC23BQ15437 767 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 MEP1AQ16819 746 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 BICRALQ6AI39 1079 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 OR9Q2Q8NGE9 314 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 FUZQ9BT04 418 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 METTL7AQ9H8H3 244 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 FAAHO00519 579 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 ADAM10O14672 748 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 HCRTR2O43614 444 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 EIF4E2O60573 245 aaKnown RBP27.96■■■□□ 2.07
CTCF-203ENST00000566078 ACER2Q5QJU3 275 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 PODNL1Q6PEZ8 512 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 MISPQ8IVT2 679 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 CADM2Q8N3J6 435 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 ATG16L2Q8NAA4 619 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 LHPPQ9H008 270 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 ANKRD19PQ9H560 264 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 GALNT9Q9HCQ5 603 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 RYDENQ9NUL5 291 aaKnown RBP27.96■■■□□ 2.07
CTCF-203ENST00000566078 C15orf41Q9Y2V0 281 aa27.96■■■□□ 2.07
CTCF-203ENST00000566078 ARGFXA6NJG6 315 aa27.95■■■□□ 2.06
CTCF-203ENST00000566078 ZNF613Q6PF04 617 aa27.95■■■□□ 2.06
CTCF-203ENST00000566078 THAP4Q8WY91 577 aa27.95■■■□□ 2.06
CTCF-203ENST00000566078 HPF1Q9NWY4 346 aa27.95■■■□□ 2.06
CTCF-203ENST00000566078 SMPD3Q9NY59 655 aaPredicted RBP27.95■■■□□ 2.06
CTCF-203ENST00000566078 CHCHD2Q9Y6H1 151 aaPredicted RBP27.95■■■□□ 2.06
CTCF-203ENST00000566078 SH3PXD2BA1X283 911 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 GMFGO60234 142 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 LINGO3P0C6S8 592 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 HSPA13P48723 471 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 DAPP51397 102 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 FAHD1Q6P587 224 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 LSMEM1Q8N8F7 131 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 RNF217Q8TC41 542 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 FGF11Q92914 225 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 SLC38A4Q969I6 547 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 PSD2Q9BQI7 771 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 RPS6KB2Q9UBS0 482 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 LRRC42Q9Y546 428 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 ASPMQ8IZT6 3477 aa27.94■■■□□ 2.06
CTCF-203ENST00000566078 MPDZO75970 2070 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 A0A0B4J2E0 115 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 A0A1B0GWA3 101 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 A0A1B0GX12 115 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 DLGAP1O14490 977 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 THRBP10828 461 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 SLC6A8P48029 635 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 GAS1P54826 345 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 COPZ1P61923 177 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 RPP38P78345 283 aaKnown RBP27.93■■■□□ 2.06
CTCF-203ENST00000566078 NKAIN4Q8IVV8 208 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 BEST3Q8N1M1 668 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 DUSP19Q8WTR2 217 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 KCNE4Q8WWG9 221 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 FEVQ99581 238 aa27.93■■■□□ 2.06
CTCF-203ENST00000566078 TMEFF2Q9UIK5 374 aaPredicted RBP27.93■■■□□ 2.06
CTCF-203ENST00000566078 C2orf72A6NCS6 295 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 ARRDC5A6NEK1 342 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 NTN1O95631 604 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 UQCRBP14927 111 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 IGFBP5P24593 272 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 RRADP55042 308 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 ZNF468Q5VIY5 522 aaPredicted RBP27.92■■■□□ 2.06
CTCF-203ENST00000566078 OSBPL11Q9BXB4 747 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 TEKT2Q9UIF3 430 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 ICAM5Q9UMF0 924 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 MSRB2Q9Y3D2 182 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 ORC6Q9Y5N6 252 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 ZNF891A8MT65 544 aaPredicted RBP27.92■■■□□ 2.06
CTCF-203ENST00000566078 OR10H3O60404 316 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 LYPD3O95274 346 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 PTGDSP41222 190 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 CASP3P42574 277 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 TAF11Q15544 211 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 KDM4DQ6B0I6 523 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 ZNF770Q6IQ21 691 aaPredicted RBP27.92■■■□□ 2.06
CTCF-203ENST00000566078 B4GALNT2Q8NHY0 566 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 WIF1Q9Y5W5 379 aa27.92■■■□□ 2.06
CTCF-203ENST00000566078 TLX3O43711 291 aaPredicted RBP27.91■■■□□ 2.06
CTCF-203ENST00000566078 SNAP29O95721 258 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 ANXA8P13928 327 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 ITPKBP27987 946 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 IDH2P48735 452 aaKnown RBP27.91■■■□□ 2.06
CTCF-203ENST00000566078 P2RX1P51575 399 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 IL1RL1Q01638 556 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 C17orf67Q0P5P2 114 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms