RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 HTR2AP28223 471 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 GAS6Q14393 721 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 KIR2DS3Q14952 304 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 FBXO42Q6P3S6 717 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 ZNF613Q6PF04 617 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 PSRC1Q6PGN9 363 aaPredicted RBP12.14□□□□□ -0.47
USB1-207ENST00000563149 ABI3BPQ7Z7G0 1075 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 SLC44A3Q8N4M1 653 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 C12orf76Q8N812 135 aaPredicted RBP12.14□□□□□ -0.47
USB1-207ENST00000563149 OR4E2Q8NGC2 313 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 OR4M1Q8NGD0 313 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 ABHD4Q8TB40 342 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 PTP4A1Q93096 173 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 LRFN5Q96NI6 719 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 OR2M4Q96R27 311 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 ZNF559Q9BR84 538 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 C7orf50Q9BRJ6 194 aaKnown RBP12.14□□□□□ -0.47
USB1-207ENST00000563149 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 TWSG1Q9GZX9 223 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 LYRM4Q9HD34 91 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 PTTG3PQ9NZH4 202 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 RABL2AQ9UBK7 228 aaPredicted RBP12.14□□□□□ -0.47
USB1-207ENST00000563149 RABL2BQ9UNT1 228 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 SIGLEC7Q9Y286 467 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 SLC22A7Q9Y694 548 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 CACNG2Q9Y698 323 aa12.14□□□□□ -0.47
USB1-207ENST00000563149 TRAV1-2A0A0B4J238 106 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 CDHR4A6H8M9 788 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ANKRD61A6NGH8 418 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 RIIAD1A6NNX1 92 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 PTP4A3O75365 173 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 EIF4EP06730 217 aaKnown RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 SLC2A5P22732 501 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 FCARP24071 287 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 WASP42768 502 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 AGFG1P52594 562 aaKnown RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 NRG3P56975 720 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 PITPNAQ00169 270 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 RIPPLY1Q0D2K3 151 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 RUNX2Q13950 521 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 MAPK14Q16539 360 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 KLHL12Q53G59 568 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 MRPL2Q5T653 305 aaKnown RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 BAIAP2L2Q6UXY1 529 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 WDR88Q6ZMY6 472 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ABHD13Q7L211 337 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 CAMKVQ8NCB2 501 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 OR10H4Q8NGA5 316 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 OR4C6Q8NH72 309 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 PFN4Q8NHR9 129 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ASB12Q8WXK4 309 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 BPIFA2Q96DR5 249 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 IFT27Q9BW83 186 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ABCG5Q9H222 651 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 DPAGT1Q9H3H5 408 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 MED20Q9H944 212 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 TMEM27Q9HBJ8 222 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 GALNT9Q9HCQ5 603 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 STMN3Q9NZ72 180 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ABRACLQ9P1F3 81 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 COPZ2Q9P299 210 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 RASD1Q9Y272 281 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 NUBP2Q9Y5Y2 271 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 A0A0G2JK05 382 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 NOTOA8MTQ0 251 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 TNFRSF10AO00220 468 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 BTN3A3O00478 584 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ATP1B1P05026 303 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 CD1AP06126 327 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 PEPDP12955 493 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 PRG2P13727 222 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ZNF3P17036 446 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 KIAA1024LP59773 190 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 RPS7P62081 194 aaKnown RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 BTBD16Q32M84 506 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 TMEM240Q5SV17 173 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 DMKNQ6E0U4 476 aaPredicted RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 TANGO2Q6ICL3 276 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ARL9Q6T311 187 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ZNF782Q6ZMW2 699 aaPredicted RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 CEACAM19Q7Z692 300 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 LRRC17Q8N6Y2 441 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 SAMD12Q8N8I0 201 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 TRMT10AQ8TBZ6 339 aaKnown RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 ART5Q96L15 291 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 CMTM3Q96MX0 182 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 OR2A5Q96R48 311 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 TBX5Q99593 518 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 SRMSQ9H3Y6 488 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ZCCHC4Q9H5U6 513 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 RANBP3Q9H6Z4 567 aaPredicted RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 SFXN1Q9H9B4 322 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 EMC7Q9NPA0 242 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ATP13A2Q9NQ11 1180 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 ZNF275Q9NSD4 429 aaPredicted RBP12.13□□□□□ -0.47
USB1-207ENST00000563149 PCOLCE2Q9UKZ9 415 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms