RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 FOXF1Q12946 379 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 KIAA0040Q15053 153 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 TSC22D1Q15714 1073 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 DUSP5Q16690 384 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 CLEC2AQ6UVW9 174 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 SZRD1Q7Z422 152 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 ZNF619Q8N2I2 560 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 CCNYL1Q8N7R7 359 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 OR10H5Q8NGA6 315 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 PPCDCQ96CD2 204 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 EGLN2Q96KS0 407 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 MRGPRX4Q96LA9 322 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 TNFRSF13CQ96RJ3 184 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 SRXN1Q9BYN0 137 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 AMBRA1Q9C0C7 1298 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 REEP4Q9H6H4 257 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 DCDC2Q9UHG0 476 aa13.96□□□□□ -0.17
HERPUD1-205ENST00000562914 ELOA3DA6NLF2 546 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 SHISA9B4DS77 424 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ZNF814B7Z6K7 855 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 SLC28A1O00337 649 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 SSX4O60224 188 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 NUDT14O95848 222 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 UROSP10746 265 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 SLC25A16P16260 332 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 SLC7A1P30825 629 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 VLDLRP98155 873 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ZNF117Q03924 483 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 SELENBP1Q13228 472 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 MLC1Q15049 377 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 CD226Q15762 336 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 TMEM249Q2WGJ8 235 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ELOA3BQ3SY89 546 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 TMEM176BQ3YBM2 270 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ARL13AQ5H913 290 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 EXOSC6Q5RKV6 272 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 TMEM108Q6UXF1 575 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 SYT10Q6XYQ8 523 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 FRMD7Q6ZUT3 714 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ELOA3Q8NG57 546 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 FBXO27Q8NI29 283 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 PHOSPHO1Q8TCT1 267 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 MTERF3Q96E29 417 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 PSD2Q9BQI7 771 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 C1orf109Q9NX04 203 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 GDF2Q9UK05 429 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ICAM5Q9UMF0 924 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 B3GALT5Q9Y2C3 310 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 CCL27Q9Y4X3 112 aa13.95□□□□□ -0.18
HERPUD1-205ENST00000562914 ZNF724A8MTY0 619 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 NDUFS7O75251 213 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 PGM3O95394 542 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 C8BP07358 591 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 MYL2P10916 166 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 NEFHP12036 1026 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 GGT1P19440 569 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 COX5AP20674 150 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 SHC1P29353 583 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 PDE7AQ13946 482 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 STK11Q15831 433 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 SLC25A53Q5H9E4 307 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 CFAP157Q5JU67 520 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 RNF165Q6ZSG1 346 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 ZAR1Q86SH2 424 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 IFT81Q8WYA0 676 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 CIDECQ96AQ7 238 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 FCRL1Q96LA6 429 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 BEX2Q9BXY8 128 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 PIGUQ9H490 435 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 COQ10BQ9H8M1 238 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 CBLN4Q9NTU7 201 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 SH3BP4Q9P0V3 963 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 TMED5Q9Y3A6 229 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 CUBNO60494 3623 aa13.94□□□□□ -0.18
HERPUD1-205ENST00000562914 IGHV4-30-2A0A087WSY4 118 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 A0A096LNT2 108 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 FAM234BA2RU67 622 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 ETV2O00321 342 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 ABCD4O14678 606 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 EFNA2O43921 213 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 CYTIPO60759 359 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 RAMP1O60894 148 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 LYZL6O75951 148 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 KRT16P08779 473 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 CSF3P09919 207 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 BMP4P12644 408 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 PRKCAP17252 672 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 PTAFRP25105 342 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 TTKP33981 857 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 ASMTP46597 345 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 C21orf58P58505 322 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 DNAJB13P59910 316 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 RASGEF1BQ0VAM2 473 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 RAB35Q15286 201 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 KLHL26Q53HC5 615 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 C3orf33Q6P1S2 294 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 KLHL17Q6TDP4 642 aa13.93□□□□□ -0.18
HERPUD1-205ENST00000562914 LRIG3Q6UXM1 1119 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms