RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 AGFG1P52594 562 aaKnown RBP16.43■□□□□ 0.22
XRCC3-218ENST00000557439 RNASE12Q5GAN4 147 aaKnown RBP16.43■□□□□ 0.22
XRCC3-218ENST00000557439 C9orf50Q5SZB4 431 aa16.43■□□□□ 0.22
XRCC3-218ENST00000557439 ZNF438Q7Z4V0 828 aa16.43■□□□□ 0.22
XRCC3-218ENST00000557439 COX18Q8N8Q8 333 aa16.43■□□□□ 0.22
XRCC3-218ENST00000557439 SLC37A3Q8NCC5 494 aa16.43■□□□□ 0.22
XRCC3-218ENST00000557439 OR52N1Q8NH53 320 aa16.43■□□□□ 0.22
XRCC3-218ENST00000557439 CD180Q99467 661 aa16.43■□□□□ 0.22
XRCC3-218ENST00000557439 TRPV4Q9HBA0 871 aa16.43■□□□□ 0.22
XRCC3-218ENST00000557439 DAPL1A0PJW8 107 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 TRAPPC13A5PLN9 417 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 B3GALT2O43825 422 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 TSFMP43897 325 aaKnown RBP16.42■□□□□ 0.22
XRCC3-218ENST00000557439 GPR18Q14330 331 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 SUZ12Q15022 739 aaKnown RBP16.42■□□□□ 0.22
XRCC3-218ENST00000557439 ITPRIPL2Q3MIP1 535 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 NOXA1Q86UR1 476 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 ARL14Q8N4G2 192 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 YIPF7Q8N8F6 280 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 OR51L1Q8NGJ5 315 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 GDF15Q99988 308 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 TMEM43Q9BTV4 400 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 ZNF350Q9GZX5 532 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 CACYBPQ9HB71 228 aaKnown RBP16.42■□□□□ 0.22
XRCC3-218ENST00000557439 MEPEQ9NQ76 525 aaPredicted RBP16.42■□□□□ 0.22
XRCC3-218ENST00000557439 CHST10O43529 356 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 LYPD3O95274 346 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 ACSL1P33121 698 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 DUSP8Q13202 625 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 ZNF542PQ5EBM4 170 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 PRPF38BQ5VTL8 546 aaKnown RBP16.42■□□□□ 0.22
XRCC3-218ENST00000557439 FIGLAQ6QHK4 219 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 MEPCEQ7L2J0 689 aaKnown RBP16.42■□□□□ 0.22
XRCC3-218ENST00000557439 SSX6Q7RTT6 188 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 RANBP3LQ86VV4 465 aaPredicted RBP16.42■□□□□ 0.22
XRCC3-218ENST00000557439 BMPERQ8N8U9 685 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 FAM3CQ92520 227 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 HS6ST2Q96MM7 605 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 BABAM2Q9NXR7 383 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 SLC22A7Q9Y694 548 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 LAMA1P25391 3075 aa16.42■□□□□ 0.22
XRCC3-218ENST00000557439 A0A0B4J203 849 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 A0A1W2PQF6 199 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 FAM172BPA6NC97 362 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 J3QLW9 94 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 HMGN1P05114 100 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 EIF4EP06730 217 aaKnown RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 LAMP2P13473 410 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 ZNF19P17023 458 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 BMP7P18075 431 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 S100A1P23297 94 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 GABRA3P34903 492 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 OR12D2P58182 307 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 FOXK2Q01167 660 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 ZNF619Q8N2I2 560 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 OR52L1Q8NGH7 329 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 CNOT9Q92600 299 aaKnown RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 HDHD2Q9H0R4 259 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 IL21RQ9HBE5 538 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 GALNT9Q9HCQ5 603 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 RBFOX1Q9NWB1 397 aaKnown RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 TDRD6O60522 2096 aaKnown RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 OR2W5A6NFC9 320 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 H0YGG7 62 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 RGS9O75916 674 aaPredicted RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 PPP1R3DO95685 299 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 FAM157BP0CG42 384 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 SMIM10L1P0DMW3 83 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 ALAS2P22557 587 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 ARF3P61204 181 aaPredicted RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 CRMP1Q14194 572 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 DEFB110Q30KQ9 67 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 FHL5Q5TD97 284 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 SYCE2Q6PIF2 218 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 VASH1Q7L8A9 365 aaPredicted RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 OR4M1Q8NGD0 313 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 OR4N2Q8NGD1 307 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 LILRB4Q8NHJ6 448 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 NR4A3Q92570 626 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 KIAA1143Q96AT1 154 aaPredicted RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 BPIFA2Q96DR5 249 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 TM4SF19Q96DZ7 209 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 PEX11GQ96HA9 241 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 SMIM10Q96HG1 83 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 BMFQ96LC9 184 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 RIPOR3Q96MK2 946 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 SERINC2Q96SA4 455 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 PIGUQ9H490 435 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 MED17Q9NVC6 651 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 ZMIZ1Q9ULJ6 1067 aa16.41■□□□□ 0.22
XRCC3-218ENST00000557439 YBX2Q9Y2T7 364 aaKnown RBP16.41■□□□□ 0.22
XRCC3-218ENST00000557439 STX11O75558 287 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 HOXB2P14652 356 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 NDUFS1P28331 727 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 INPP1P49441 399 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 SNRPD2P62316 118 aaKnown RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 OR5W2Q8NH69 310 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 NT5CQ8TCD5 201 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 C4orf36Q96KX1 117 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms