RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ASB9Q96DX5 294 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 C5orf34Q96MH7 638 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 ARHGDIGQ99819 225 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 PRR14Q9BWN1 585 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 TBL1XR1Q9BZK7 514 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 LAT2Q9GZY6 243 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 DSN1Q9H410 356 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF703Q9H7S9 590 aaPredicted RBP9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 ACTR3BQ9P1U1 418 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 POMPQ9Y244 141 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 IFT52Q9Y366 437 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 SNX13Q9Y5W8 968 aa9.71□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF407Q9C0G0 2248 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 TMEM247A6NEH6 219 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 KLRC4-KLRK1H3BQV0 150 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 SYT5O00445 386 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF264O43296 627 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 EFNA2O43921 213 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 EIF4E2O60573 245 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 NTN1O95631 604 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 SERPINA1P01009 418 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 UBTFL6P0CB48 400 aaPredicted RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 GKN3PP0CG01 181 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 UBL4AP11441 157 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ACADSP16219 412 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 IL7RP16871 459 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 PSMA4P25789 261 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 HTR2AP28223 471 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 RASSF2P50749 326 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 B3GALT5-AS1P59052 145 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 SELENOWP63302 87 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 RPP38P78345 283 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 C17orf67Q0P5P2 114 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 BNIP2Q12982 314 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ELOAQ14241 798 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 NRF1Q16656 503 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 LRRC23Q53EV4 343 aaPredicted RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 INTS11Q5TA45 600 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ENPP6Q6UWR7 440 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ARSKQ6UWY0 536 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 EIF3MQ7L2H7 374 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 VTCN1Q7Z7D3 282 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 KRT73Q86Y46 540 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 PLCZ1Q86YW0 608 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 SPPL2CQ8IUH8 684 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 CHERPQ8IWX8 916 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 TMEM251Q8N6I4 163 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF614Q8N883 585 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF527Q8NB42 609 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 POC1BQ8TC44 478 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 GPR119Q8TDV5 335 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 PHF10Q8WUB8 498 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 CCDC124Q96CT7 223 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 C1GALT1C1Q96EU7 318 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 SH3YL1Q96HL8 342 aaPredicted RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF607Q96SK3 696 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 PINK1Q9BXM7 581 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 ZDHHC11Q9H8X9 412 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 EXOSC3Q9NQT5 275 aaKnown RBP9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 OLAHQ9NV23 265 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 SEC14L3Q9UDX4 400 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 MAGEL2Q9UJ55 1249 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 SLC35A3Q9Y2D2 325 aa9.7□□□□□ -0.86
NPIPB3-210ENST00000542817 FREM3P0C091 2139 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 M0R3H8 397 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 PDLIM1O00151 329 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 HCRTR2O43614 444 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 SERPINB7O75635 380 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 PDE9AO76083 593 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 LYPD3O95274 346 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 CSTAP01040 98 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 THY1P04216 161 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 HPNP05981 417 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 C8BP07358 591 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 LINGO3P0C6S8 592 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 SFTPCP11686 197 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 ENDOUP21128 410 aaKnown RBP9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 KLRB1Q12918 225 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 EPS8Q12929 822 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 TRAP1Q12931 704 aaKnown RBP9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 LARS2Q15031 903 aaKnown RBP9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 CYP2R1Q6VVX0 501 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 MISPQ8IVT2 679 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 LSM14AQ8ND56 463 aaKnown RBP9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 OR6T1Q8NGN1 323 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 OR1J4Q8NGS1 313 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 B4GALNT2Q8NHY0 566 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 SLC35B4Q969S0 331 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 C7orf34Q96L11 122 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF597Q96LX8 424 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 OR2B2Q9GZK3 357 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 MMADHCQ9H3L0 296 aaPredicted RBP9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 RNPEPL1Q9HAU8 725 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 PLSCR2Q9NRY7 297 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 MED17Q9NVC6 651 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 PPP4R1LQ9P1A2 415 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 LIPGQ9Y5X9 500 aa9.69□□□□□ -0.86
NPIPB3-210ENST00000542817 SVILO95425 2214 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms