RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SRMSQ9H3Y6 488 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 WDR54Q9H977 334 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 UGT1A7Q9HAW7 530 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 UGT1A10Q9HAW8 530 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 UGT1A8Q9HAW9 530 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 IL26Q9NPH9 171 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 SPHK1Q9NYA1 384 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 HOOK1Q9UJC3 728 aaKnown RBP4.68□□□□□ -1.66
CLIP1-207ENST00000536634 SLC7A7Q9UM01 511 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 MRPS2Q9Y399 296 aaKnown RBP4.68□□□□□ -1.66
CLIP1-207ENST00000536634 AP1M2Q9Y6Q5 423 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 SCN2AQ99250 2005 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 PHF3Q92576 2039 aaKnown RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 A0A1B0GX78 115 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 OR2A25A4D2G3 310 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 VSTM2BA6NLU5 285 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 TMCO5BA8MYB1 307 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 C2orf74A8MZ97 194 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 NPIPA5E9PKD4 350 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 PES1O00541 588 aaKnown RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 CTDSP2O14595 271 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 CTAG2O75638 210 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 ZWINTO95229 277 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 CLPTM1O96005 669 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 SLC35G4P0C7Q5 338 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 UGT2B7P16662 529 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 PEBP1P30086 187 aaKnown RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 SERPINB6P35237 376 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 OR1D4P47884 311 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 ARSEP51690 589 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 EFNA3P52797 238 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 PNLIPRP2P54317 469 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 KLC1Q07866 573 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 PRKG2Q13237 762 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 FFAR4Q5NUL3 377 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 NCBP2-AS2Q69YL0 99 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 LDB1Q86U70 411 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 SIAH3Q8IW03 269 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 HSCBQ8IWL3 235 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 PRSS58Q8IYP2 241 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 C17orf53Q8N3J3 647 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 RPRMLQ8N4K4 120 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 CPSF7Q8N684 471 aaKnown RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF383Q8NA42 475 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 DDHD1Q8NEL9 900 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 CCDC110Q8TBZ0 833 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 BRSK1Q8TDC3 778 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 TEKT4Q8WW24 435 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 N4BP2L2Q92802 583 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 C18orf12Q96KH6 178 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 AGPAT1Q99943 283 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 TRIM51Q9BSJ1 452 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 MAK16Q9BXY0 300 aaKnown RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 MRM3Q9HC36 420 aaKnown RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 ACKR4Q9NPB9 350 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 INTS10Q9NVR2 710 aaKnown RBP4.67□□□□□ -1.66
CLIP1-207ENST00000536634 KCNN3Q9UGI6 736 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 NPIPA1Q9UND3 350 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.67□□□□□ -1.668e-8■■■□□ 15.7
CLIP1-207ENST00000536634 COLEC10Q9Y6Z7 277 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 MPDZO75970 2070 aa4.67□□□□□ -1.66
CLIP1-207ENST00000536634 NSG1A0A0A6YYJ2 146 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 A0A0J9YY10 115 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 OR5H15A6NDH6 313 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 GOLGA6L4A6NEF3 574 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 MGAT4DA6NG13 374 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 KCNK1O00180 336 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 SSX4O60224 188 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 LY6G6DO95868 133 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 IGLV1-44P01699 117 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 SERPINA7P05543 415 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 TPOP07202 933 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 HOXD4P09016 255 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 TPBGLP0DKB5 382 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 ABOP16442 354 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF26P17031 533 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 DESP17661 470 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 PTMSP20962 102 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 GCH1P30793 250 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 CEACAM8P31997 349 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 NSG1P42857 185 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 VEGFCP49767 419 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 SLC25A11Q02978 314 aaKnown RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 GBE1Q04446 702 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 SNTB1Q13884 538 aaKnown RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 PTPRCAPQ14761 206 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 SLC5A12Q1EHB4 618 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF658BQ4V348 819 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-207ENST00000536634 TFDP3Q5H9I0 405 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 LDLRAP1Q5SW96 308 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 CES4AQ5XG92 561 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF497Q6ZNH5 498 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 NDUFAF7Q7L592 441 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 NLRP9Q7RTR0 991 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 NT5DC3Q86UY8 548 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 AMIGO1Q86WK6 493 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 CFAP206Q8IYR0 622 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 OR1J1Q8NGS3 322 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 OR2AJ1Q8NGZ0 328 aa4.66□□□□□ -1.66
CLIP1-207ENST00000536634 OR2L2Q8NH16 312 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms