RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 POFUT2Q9Y2G5 429 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 CPSF4LA6NMK7 179 aaKnown RBP17■□□□□ 0.31
SMPD1-208ENST00000533123 NTN1O95631 604 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 AK1P00568 194 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 WT1P19544 449 aaPredicted RBP17■□□□□ 0.31
SMPD1-208ENST00000533123 RPS4Y1P22090 263 aaKnown RBP17■□□□□ 0.31
SMPD1-208ENST00000533123 EEF1A1P68104 462 aaKnown RBP17■□□□□ 0.31
SMPD1-208ENST00000533123 Q0VFX4 171 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 BORAQ6PGQ7 559 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 OR8K3Q8NH51 312 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 NUBPLQ8TB37 319 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 EFHD2Q96C19 240 aaPredicted RBP17■□□□□ 0.31
SMPD1-208ENST00000533123 SAP130Q9H0E3 1048 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 ZNF556Q9HAH1 456 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 IFT52Q9Y366 437 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 NCOR2Q9Y618 2525 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 A0A1W2PRQ8 180 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 ARRDC5A6NEK1 342 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 E9PQ18 207 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 FAAHO00519 579 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 PCSK6P29122 969 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 RYKP34925 604 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 DGCR6Q14129 220 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 LARS2Q15031 903 aaKnown RBP16.99■□□□□ 0.31
SMPD1-208ENST00000533123 C6orf141Q5SZD1 244 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 PODNL1Q6PEZ8 512 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 KLHL17Q6TDP4 642 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 C17orf47Q8NEP4 570 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 OR5L2Q8NGL0 311 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 PITX2Q99697 317 aa16.99■□□□□ 0.31
SMPD1-208ENST00000533123 TRIM45Q9H8W5 580 aaPredicted RBP16.99■□□□□ 0.31
SMPD1-208ENST00000533123 CACYBPQ9HB71 228 aaKnown RBP16.99■□□□□ 0.31
SMPD1-208ENST00000533123 SH3PXD2BA1X283 911 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 NKX2-8O15522 239 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 OR10H3O60404 316 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 ZNF354AO60765 605 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-208ENST00000533123 BCAS1O75363 584 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-208ENST00000533123 RGS8P57771 180 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-208ENST00000533123 TAS2R41P59536 307 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 DECR1Q16698 335 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 FBLIM1Q8WUP2 373 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 ITFG2Q969R8 447 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 TP53INP1Q96A56 240 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 ARSGQ96EG1 525 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 KLHL28Q9NXS3 571 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 MYOTQ9UBF9 498 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 ZNF232Q9UNY5 417 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 TLX3O43711 291 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-208ENST00000533123 ICAM2P13598 275 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 CRHBPP24387 322 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 ABCD3P28288 659 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 NR1H2P55055 460 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 CDK5R2Q13319 367 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 FLYWCH1Q4VC44 716 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 SETD9Q8NE22 299 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 HDAC2Q92769 488 aaKnown RBP16.98■□□□□ 0.31
SMPD1-208ENST00000533123 HRASLS5Q96KN8 279 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 TIMMDC1Q9NPL8 285 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 MED13Q9UHV7 2174 aa16.98■□□□□ 0.31
SMPD1-208ENST00000533123 DOCK10Q96BY6 2186 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 TO15178 435 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 DBIP07108 87 aaKnown RBP16.97■□□□□ 0.31
SMPD1-208ENST00000533123 THBS1P07996 1170 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 PRKAR1AP10644 381 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 SMIM11AP58511 58 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 MRPL2Q5T653 305 aaKnown RBP16.97■□□□□ 0.31
SMPD1-208ENST00000533123 FCRLBQ6BAA4 426 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 DESI1Q6ICB0 168 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 PGBD2Q6P3X8 592 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 HSPBAP1Q96EW2 488 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 ADOQ96SZ5 270 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 APOL4Q9BPW4 351 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 G6PC3Q9BUM1 346 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 YTHDF1Q9BYJ9 559 aaKnown RBP16.97■□□□□ 0.31
SMPD1-208ENST00000533123 RASSF1Q9NS23 344 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 CEPT1Q9Y6K0 416 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 A0A087WXM4 84 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 H3BSA7 217 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 REM1O75628 298 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 OR2J2O76002 312 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 PRG2P13727 222 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 NID1P14543 1247 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 EEF1B2P24534 225 aaKnown RBP16.97■□□□□ 0.31
SMPD1-208ENST00000533123 FMO3P31513 532 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 ST13P50502 369 aaKnown RBP16.97■□□□□ 0.31
SMPD1-208ENST00000533123 HLCSP50747 726 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 PLAURQ03405 335 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 PLCXD2Q0VAA5 305 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 ENTPD8Q5MY95 495 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 DCAF10Q5QP82 559 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 KCNE4Q8WWG9 221 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 DIO2Q92813 273 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 FAM210AQ96ND0 272 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 IP6K3Q96PC2 410 aa16.97■□□□□ 0.31
SMPD1-208ENST00000533123 CNTRLQ7Z7A1 2325 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 SLC1A7O00341 560 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 KLK10O43240 276 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 OXSR1O95747 527 aaPredicted RBP16.96■□□□□ 0.31
SMPD1-208ENST00000533123 GKN3PP0CG01 181 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 NRG3P56975 720 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms