RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ROBO4Q8WZ75 1007 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 CPNE4Q96A23 557 aaPredicted RBP15.02■□□□□ -0
CPSF1-207ENST00000531727 TUBGCP3Q96CW5 907 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 OR10A4Q9H209 315 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 C12orf49Q9H741 205 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 ZNF395Q9H8N7 513 aaPredicted RBP15.02■□□□□ -0
CPSF1-207ENST00000531727 TIGARQ9NQ88 270 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 GJE1A6NN92 205 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 NPIPB9F8W1W9 429 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF195O14628 629 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 CFLARO15519 480 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 G6PDP11413 515 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 PSMB1P20618 241 aaKnown RBP15.01□□□□□ -0.01
CPSF1-207ENST00000531727 C21orf58P58505 322 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 MAD2L1Q13257 205 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-207ENST00000531727 RNPS1Q15287 305 aaKnown RBP15.01□□□□□ -0.01
CPSF1-207ENST00000531727 CLEC9AQ6UXN8 241 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 Q71RC1 249 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-207ENST00000531727 OR5AK3PQ8NH89 298 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 PPP1R14CQ8TAE6 165 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 GPR119Q8TDV5 335 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 REXO5Q96IC2 774 aaKnown RBP15.01□□□□□ -0.01
CPSF1-207ENST00000531727 OR7D2Q96RA2 312 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 DUSP26Q9BV47 211 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 SRXN1Q9BYN0 137 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 ACTR6Q9GZN1 396 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 GPR52Q9Y2T5 361 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 DTNAQ9Y4J8 743 aa15.01□□□□□ -0.01
CPSF1-207ENST00000531727 FAM171A2A8MVW0 826 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 GTPBP1O00178 669 aaKnown RBP15□□□□□ -0.01
CPSF1-207ENST00000531727 TYROBPO43914 113 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 PRKCAP17252 672 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 SOAT1P35610 550 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 ETV4P43268 484 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 NR1H2P55055 460 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 HBA1P69905 142 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 EMX2Q04743 252 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 TOMM34Q15785 309 aaPredicted RBP15□□□□□ -0.01
CPSF1-207ENST00000531727 NDUFAF6Q330K2 333 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 TMEM201Q5SNT2 666 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 BHLHB9Q6PI77 547 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF704Q6ZNC4 412 aaPredicted RBP15□□□□□ -0.01
CPSF1-207ENST00000531727 PLEKHM3Q6ZWE6 761 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 YTHDF3Q7Z739 585 aaKnown RBP15□□□□□ -0.01
CPSF1-207ENST00000531727 WFDC8Q8IUA0 241 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 OR5D16Q8NGK9 328 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 AENQ8WTP8 325 aaKnown RBP15□□□□□ -0.01
CPSF1-207ENST00000531727 ABHD3Q8WU67 409 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 PERPQ96FX8 193 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 COX4I2Q96KJ9 171 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 MRGPRX4Q96LA9 322 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 Q96MF0 132 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 SDF2Q99470 211 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 ASIC5Q9NY37 505 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 KLHL13Q9P2N7 655 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 HEATR5AQ86XA9 2040 aa15□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF264O43296 627 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 EIF4E2O60573 245 aaKnown RBP14.99□□□□□ -0.01
CPSF1-207ENST00000531727 NTN1O95631 604 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 HEXAP06865 529 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 UBL4AP11441 157 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 CLDN8P56748 225 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 SELENBP1Q13228 472 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 SMU1Q2TAY7 513 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 PGS1Q32NB8 556 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 TMEM176BQ3YBM2 270 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-207ENST00000531727 SLC25A53Q5H9E4 307 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 EMBQ6PCB8 327 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 TFAP2EQ6VUC0 442 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 FCRLAQ7L513 359 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 NUDCD3Q8IVD9 361 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF614Q8N883 585 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 TOR1AIP2Q8NFQ8 470 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 STEAP2Q8NFT2 490 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 OR5W2Q8NH69 310 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 ZFP90Q8TF47 636 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 IGFBPL1Q8WX77 278 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 ARSGQ96EG1 525 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 PLPPR2Q96GM1 343 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 ZIM3Q96PE6 472 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 GSX2Q9BZM3 304 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 NMUR2Q9GZQ4 415 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 COQ10BQ9H8M1 238 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 GP6Q9HCN6 339 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 NOP53Q9NZM5 478 aaKnown RBP14.99□□□□□ -0.01
CPSF1-207ENST00000531727 DSCAMO60469 2012 aa14.99□□□□□ -0.01
CPSF1-207ENST00000531727 DUXAA6NLW8 204 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 H7C1Q1 480 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 ETV2O00321 342 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-207ENST00000531727 GCM2O75603 506 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-207ENST00000531727 PRKD3O94806 890 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 AK1P00568 194 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 PLAUP00749 431 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 MATN1P21941 496 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 PTH2RP49190 550 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 RPS26P62854 115 aaKnown RBP14.98□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF844Q08AG5 666 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 CBFBQ13951 182 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 PDZK1Q5T2W1 519 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 NUFIP2Q7Z417 695 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms