RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	NPAS1	Q99742	590 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	HDHD5	Q9BXW7	423 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	GSX2	Q9BZM3	304 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	CXorf36	Q9H7Y0	433 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	GP6	Q9HCN6	339 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	KLHL13	Q9P2N7	655 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	SLC17A7	Q9P2U7	560 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	LGALS13	Q9UHV8	139 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	CARD8	Q9Y2G2	431 aa		13.99	□□□□□ -0.17
CDK16-222	ENST00000523699	ABCA4	P78363	2273 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	NPIPA5	A0A0B4J1W7	369 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	NPIPA7	E9PJI5	369 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	ZNF195	O14628	629 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	AK1	P00568	194 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	FREM3	P0C091	2139 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	NPIPA8	P0DM63	369 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	UBL4A	P11441	157 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	PTH2R	P49190	550 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	ATP12A	P54707	1039 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	CBFB	Q13951	182 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	KLHL26	Q53HC5	615 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	ALKBH2	Q6NS38	261 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	SLC43A2	Q8N370	569 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	RFWD2	Q8NHY2	731 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	ZFP90	Q8TF47	636 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	ABHD3	Q8WU67	409 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	ROBO4	Q8WZ75	1007 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	DUSP26	Q9BV47	211 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	GPATCH2	Q9NW75	528 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	ICAM5	Q9UMF0	924 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	DTNA	Q9Y4J8	743 aa		13.98	□□□□□ -0.17
CDK16-222	ENST00000523699	AKAP6	Q13023	2319 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	DUXA	A6NLW8	204 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	HS3ST1	O14792	307 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	SMAD7	O15105	426 aa	Known RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	KLF4	O43474	513 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	PRKD3	O94806	890 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	LOX	P28300	417 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	RNF144A	P50876	292 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	CBLN3	Q6UW01	205 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	C22orf34	Q6ZV56	151 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	FCRLA	Q7L513	359 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	KRTCAP2	Q8N6L1	136 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	ATP6V1C2	Q8NEY4	427 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	OR5AK3P	Q8NH89	298 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	NUDT8	Q8WV74	236 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	S100PBP	Q96BU1	408 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	COQ8B	Q96D53	544 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	OR7D2	Q96RA2	312 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	USB1	Q9BQ65	265 aa	Known RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	ESRP2	Q9H6T0	727 aa	Known RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	L2HGDH	Q9H9P8	463 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	NOP53	Q9NZM5	478 aa	Known RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	KLHL9	Q9P2J3	617 aa		13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK16-222	ENST00000523699	MED12	Q93074	2177 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	TRIM64	A6NGJ6	449 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	TRIM64B	A6NI03	449 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	ZNF264	O43296	627 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	EIF4E2	O60573	245 aa	Known RBP	13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	LY6G6D	O95868	133 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	PRKCA	P17252	672 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	SHC1	P29353	583 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	PGS1	Q32NB8	556 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	C3orf33	Q6P1S2	294 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	TFAP2E	Q6VUC0	442 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	ZNF611	Q8N823	705 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	OR5W2	Q8NH69	310 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	KISS1R	Q969F8	398 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	SLC35G5	Q96KT7	338 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	C3orf30	Q96M34	536 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	ZIM3	Q96PE6	472 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	SRXN1	Q9BYN0	137 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	POTEKP	Q9BYX7	375 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	SERINC1	Q9NRX5	453 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	EXD2	Q9NVH0	621 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	PCDHGB4	Q9UN71	923 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	RNF115	Q9Y4L5	304 aa		13.96	□□□□□ -0.17
CDK16-222	ENST00000523699	NIPBL	Q6KC79	2804 aa	eCLIP	13.96	□□□□□ -0.18
CDK16-222	ENST00000523699	RNF103-CHMP3	A0A140T963	221 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	SERINC4	A6NH21	518 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	CLOCK	O15516	846 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	OIP5	O43482	229 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	CYP7B1	O75881	506 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	AGR2	O95994	175 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	BPGM	P07738	259 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	YES1	P07947	543 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	G6PD	P11413	515 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	ATP5J2	P56134	94 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	RPS4X	P62701	263 aa	Known RBP	13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	HBA1	P69905	142 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	PPP2R2B	Q00005	443 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	CAPRIN1	Q14444	709 aa	Known RBP	13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	P2RY6	Q15077	328 aa		13.95	□□□□□ -0.18
CDK16-222	ENST00000523699	QPRT	Q15274	297 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms