RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 BPIFA2Q96DR5 249 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 HS6ST2Q96MM7 605 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 HDHD2Q9H0R4 259 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 CCDC86Q9H6F5 360 aaKnown RBP13.04□□□□□ -0.32
CLOCK-211ENST00000513440 DZANK1Q9NVP4 752 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 NLKQ9UBE8 527 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 URADA6NGE7 173 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 HRKO00198 91 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 NDUFS1P28331 727 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 KIR2DL3P43628 341 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 OR10A3P58181 314 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 MAT1AQ00266 395 aaKnown RBP13.04□□□□□ -0.32
CLOCK-211ENST00000513440 RNLSQ5VYX0 342 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 TAF8Q7Z7C8 310 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 CLIP3Q96DZ5 547 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 SENP5Q96HI0 755 aaPredicted RBP13.04□□□□□ -0.32
CLOCK-211ENST00000513440 WDFY2Q96P53 400 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 PIGUQ9H490 435 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 IL21RQ9HBE5 538 aa13.04□□□□□ -0.32
CLOCK-211ENST00000513440 PLA2G10O15496 165 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 HMGN1P05114 100 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 HNRNPA2B1P22626 353 aaKnown RBP13.03□□□□□ -0.32
CLOCK-211ENST00000513440 MYL9P24844 172 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 SHC1P29353 583 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 TNFRSF4P43489 277 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 TSFMP43897 325 aaKnown RBP13.03□□□□□ -0.32
CLOCK-211ENST00000513440 TPMTP51580 245 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 KIR2DS3Q14952 304 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 CEBPEQ15744 281 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 SYT9Q86SS6 491 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 ACBD7Q8N6N7 88 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 ATF6BQ99941 703 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 PPIL3Q9H2H8 161 aaKnown RBP13.03□□□□□ -0.32
CLOCK-211ENST00000513440 KRCC1Q9NPI7 259 aaPredicted RBP13.03□□□□□ -0.32
CLOCK-211ENST00000513440 SPACA6W5XKT8 324 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 KCNJ13O60928 360 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 PGDP52209 483 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 E2F1Q01094 437 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 EIPR1Q53HC9 387 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 LCN1P1Q5VSP4 162 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 PRPF38BQ5VTL8 546 aaKnown RBP13.03□□□□□ -0.32
CLOCK-211ENST00000513440 CDK20Q8IZL9 346 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 GATSQ8NAP1 163 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 SLC37A3Q8NCC5 494 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 NT5CQ8TCD5 201 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 SARGQ9BW04 601 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 RNF32Q9H0A6 362 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 FN3KQ9H479 309 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 WSB2Q9NYS7 404 aaPredicted RBP13.03□□□□□ -0.32
CLOCK-211ENST00000513440 CPNE7Q9UBL6 633 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 C19orf53Q9UNZ5 99 aaPredicted RBP13.03□□□□□ -0.32
CLOCK-211ENST00000513440 PIAS3Q9Y6X2 628 aa13.03□□□□□ -0.32
CLOCK-211ENST00000513440 TRDV1A0A1B0GX56 115 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 B4DGG1 531 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 PRR23D1E9PI22 279 aaPredicted RBP13.02□□□□□ -0.32
CLOCK-211ENST00000513440 PRR23D2P0DMB1 279 aaPredicted RBP13.02□□□□□ -0.32
CLOCK-211ENST00000513440 EMDP50402 254 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 CRMP1Q14194 572 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 QPRTQ15274 297 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 VASNQ6EMK4 673 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 NIPAL3Q6P499 406 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 TMEM91Q6ZNR0 172 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 USP53Q70EK8 1073 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 FAM60AQ9NP50 221 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 A0A0A6YYC8 382 aaPredicted RBP13.02□□□□□ -0.32
CLOCK-211ENST00000513440 A0A1W2PRG6 482 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 B4DXG7 233 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 I3L1I5 382 aaPredicted RBP13.02□□□□□ -0.32
CLOCK-211ENST00000513440 KLF4O43474 513 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 CHST10O43529 356 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 ADAM11O75078 769 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 PAHP00439 452 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.32
CLOCK-211ENST00000513440 POU6F2P78424 691 aaPredicted RBP13.02□□□□□ -0.32
CLOCK-211ENST00000513440 DUSP8Q13202 625 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 MRGPREQ86SM8 312 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 RFLNBQ8N5W9 214 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 SETD6Q8TBK2 473 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 SLC37A2Q8TED4 501 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 CTRCQ99895 268 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 MRPS18AQ9NVS2 196 aaKnown RBP13.02□□□□□ -0.32
CLOCK-211ENST00000513440 EXTL2Q9UBQ6 330 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 MED31Q9Y3C7 131 aa13.02□□□□□ -0.32
CLOCK-211ENST00000513440 MN1Q10571 1320 aaPredicted RBP13.02□□□□□ -0.33
CLOCK-211ENST00000513440 CENPXA8MT69 81 aa13.02□□□□□ -0.33
CLOCK-211ENST00000513440 GTPBP1O00178 669 aaKnown RBP13.02□□□□□ -0.33
CLOCK-211ENST00000513440 RNF13O43567 381 aa13.02□□□□□ -0.33
CLOCK-211ENST00000513440 DBIP07108 87 aaKnown RBP13.02□□□□□ -0.33
CLOCK-211ENST00000513440 NID1P14543 1247 aa13.02□□□□□ -0.33
CLOCK-211ENST00000513440 BMP8BP34820 402 aa13.02□□□□□ -0.33
CLOCK-211ENST00000513440 NAA10P41227 235 aaPredicted RBP13.02□□□□□ -0.33
CLOCK-211ENST00000513440 FOXK2Q01167 660 aa13.02□□□□□ -0.33
CLOCK-211ENST00000513440 CRYZQ08257 329 aaKnown RBP13.02□□□□□ -0.33
CLOCK-211ENST00000513440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms