RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 VMP1Q96GC9 406 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 DSN1Q9H410 356 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 DUSP21Q9H596 190 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 PARD6AQ9NPB6 346 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 NCDNQ9UBB6 729 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 C19orf25Q9UFG5 118 aaPredicted RBP15.04■□□□□ -0
HLA-A-208ENST00000496081 TPRKBQ9Y3C4 175 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 HEATR5AQ86XA9 2040 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 WDFY3Q8IZQ1 3526 aa15.04■□□□□ -0
HLA-A-208ENST00000496081 SMIM31A0A1B0GVY4 71 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 PMS2P1A4D2B8 440 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 CHP2O43745 196 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 KLF7O75840 302 aaPredicted RBP15.03■□□□□ -0
HLA-A-208ENST00000496081 PNLIPRP2P54317 469 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 RAB15P59190 212 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 SLC35A2P78381 396 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 CSRP2Q16527 193 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 C12orf73Q69YU5 71 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 C16orf47Q6ZP98 133 aaPredicted RBP15.03■□□□□ -0
HLA-A-208ENST00000496081 RASSF6Q6ZTQ3 369 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 P3H2Q8IVL5 708 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 PFN4Q8NHR9 129 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 PHOSPHO1Q8TCT1 267 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 RHNO1Q9BSD3 238 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 PLA2G12AQ9BZM1 189 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 EGLN3Q9H6Z9 239 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 TOR4AQ9NXH8 423 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 SCN3BQ9NY72 215 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 OTOGLQ3ZCN5 2332 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 C9J4A7 227 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 TMX2-CTNND1H3BSU7 103 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 OIP5O43482 229 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 FAM20BO75063 409 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 STK17BO94768 372 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 UMODP07911 640 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 UBL4AP11441 157 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 GIPRP48546 466 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 SLC26A5P58743 744 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 CSNK2BP67870 215 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 CDK5Q00535 292 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 NHLH1Q02575 133 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 TEKQ02763 1124 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 SKP2Q13309 424 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 NCF4Q15080 339 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 ALG10BQ5I7T1 473 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 KIRREL2Q6UWL6 708 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 ZNF440Q8IYI8 595 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 SPARTQ8N0X7 666 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 CADM2Q8N3J6 435 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 IQCF1Q8N6M8 205 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 NUBPLQ8TB37 319 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 LIN37Q96GY3 246 aaPredicted RBP15.03■□□□□ -0
HLA-A-208ENST00000496081 RTN4RQ9BZR6 473 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 POLR1BQ9H9Y6 1135 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 KRCC1Q9NPI7 259 aaPredicted RBP15.03■□□□□ -0
HLA-A-208ENST00000496081 NDUFA13Q9P0J0 144 aa15.03■□□□□ -0
HLA-A-208ENST00000496081 PTRH2Q9Y3E5 179 aaKnown RBP15.03■□□□□ -0
HLA-A-208ENST00000496081 TRBV11-1A0A0K0K1C0 115 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 CDC42EP2O14613 210 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 ZNF264O43296 627 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 MPZL2O60487 215 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 CSO75390 466 aaKnown RBP15.02□□□□□ -0.01
HLA-A-208ENST00000496081 STAT5AP42229 794 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 PSPHP78330 225 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 PRKCDQ05655 676 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 GINS1Q14691 196 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 ULK3Q6PHR2 472 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 CBLN3Q6UW01 205 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 LINC00114Q6XXX2 140 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 PTCHD4Q6ZW05 846 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 ZNF540Q8NDQ6 660 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 OR8D4Q8NGM9 314 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 THAP3Q8WTV1 239 aaPredicted RBP15.02□□□□□ -0.01
HLA-A-208ENST00000496081 MPP4Q96JB8 637 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 HS6ST2Q96MM7 605 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 NODALQ96S42 347 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 ZNF426Q9BUY5 554 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 RBM38Q9H0Z9 239 aaKnown RBP15.02□□□□□ -0.01
HLA-A-208ENST00000496081 EXOSC3Q9NQT5 275 aaKnown RBP15.02□□□□□ -0.01
HLA-A-208ENST00000496081 C20orf141Q9NUB4 165 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 PLCXD1Q9NUJ7 323 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 ERVK-18Q9QC07 812 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 PISDQ9UG56 409 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 CARD8Q9Y2G2 431 aa15.02□□□□□ -0.01
HLA-A-208ENST00000496081 LOC102723996A0A087X1L8 192 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 TMEM200CA6NKL6 621 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 GTPBP1O00178 669 aaKnown RBP15.01□□□□□ -0.01
HLA-A-208ENST00000496081 ZNF354AO60765 605 aaPredicted RBP15.01□□□□□ -0.01
HLA-A-208ENST00000496081 MT-CO3P00414 261 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 NGFRP08138 427 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 NRG3P56975 720 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 ACSM5Q6NUN0 579 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 CASP12Q6UXS9 341 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 OR8K3Q8NH51 312 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 TAAR9Q96RI9 348 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 ZPBPQ9BS86 351 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 SLC25A19Q9HC21 320 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 ATP13A2Q9NQ11 1180 aa15.01□□□□□ -0.01
HLA-A-208ENST00000496081 MEPEQ9NQ76 525 aaPredicted RBP15.01□□□□□ -0.01
HLA-A-208ENST00000496081 IL20Q9NYY1 176 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms