RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 ACTRT3Q9BYD9 372 aa10.06□□□□□ -0.8
DUBR-204ENST00000490441 ACTR6Q9GZN1 396 aa10.06□□□□□ -0.8
DUBR-204ENST00000490441 C12orf49Q9H741 205 aa10.06□□□□□ -0.8
DUBR-204ENST00000490441 SIRT3Q9NTG7 399 aaPredicted RBP10.06□□□□□ -0.8
DUBR-204ENST00000490441 GIN1Q9NXP7 522 aa10.06□□□□□ -0.8
DUBR-204ENST00000490441 GPR52Q9Y2T5 361 aa10.06□□□□□ -0.8
DUBR-204ENST00000490441 PRR14LQ5THK1 2151 aa10.06□□□□□ -0.8
DUBR-204ENST00000490441 HEATR5AQ86XA9 2040 aa10.06□□□□□ -0.8
DUBR-204ENST00000490441 H7C1Q1 480 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 SPAG7O75391 227 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 SKAP2O75563 359 aaPredicted RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 SLU7O95391 586 aaKnown RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 C6orf47O95873 294 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 HEXAP06865 529 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 LINGO3P0C6S8 592 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 PSMA4P25789 261 aaKnown RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 ADH6P28332 368 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 AGTR1P30556 359 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 SOAT1P35610 550 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 SERPINB5P36952 375 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 P2RX1P51575 399 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 ZNF117Q03924 483 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 PTGR1Q14914 329 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 UGT3A2Q3SY77 523 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 XKR7Q5GH72 579 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 EXOSC6Q5RKV6 272 aaKnown RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 DCST2Q5T1A1 773 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 IL23RQ5VWK5 629 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 ALKBH2Q6NS38 261 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 BHLHB9Q6PI77 547 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 STAC2Q6ZMT1 411 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 ZNF704Q6ZNC4 412 aaPredicted RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 ZCCHC23Q6ZST2 131 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 TMCO5AQ8N6Q1 288 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 PPP1R14CQ8TAE6 165 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 POC1BQ8TC44 478 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 SFXN5Q8TD22 340 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 TMEM171Q8WVE6 324 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 ROBO4Q8WZ75 1007 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 ARL8AQ96BM9 186 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 MARK4Q96L34 752 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 NPAS1Q99742 590 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 TACO1Q9BSH4 297 aaKnown RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 OR10A4Q9H209 315 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 CXorf56Q9H5V9 222 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 SLC17A7Q9P2U7 560 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 GIMAP2Q9UG22 337 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 CARD8Q9Y2G2 431 aa10.05□□□□□ -0.8
DUBR-204ENST00000490441 GPC6Q9Y625 555 aaPredicted RBP10.05□□□□□ -0.8
DUBR-204ENST00000490441 FN1P02751 2386 aaKnown RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 NPIPA5A0A0B4J1W7 369 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 NPIPA7E9PJI5 369 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 ZNF195O14628 629 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 THBDP07204 575 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 NPIPA8P0DM63 369 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 PSMB1P20618 241 aaKnown RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 PRPS1L1P21108 318 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 IL32P24001 234 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 LOXP28300 417 aaPredicted RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 SLC7A1P30825 629 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 CCR4P51679 360 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 ATP12AP54707 1039 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 MAD2L1Q13257 205 aaPredicted RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 ZNF239Q16600 458 aaKnown RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 TMEM176BQ3YBM2 270 aaPredicted RBP10.04□□□□□ -0.8
DUBR-204ENST00000490441 C6orf136Q5SQH8 315 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 C22orf34Q6ZV56 151 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 ATP6V1C2Q8NEY4 427 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 STEAP2Q8NFT2 490 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 RFWD2Q8NHY2 731 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 FBXO27Q8NI29 283 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 PSMA8Q8TAA3 256 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 TCP10LQ8TDR4 215 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 RNF128Q8TEB7 428 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 ABHD3Q8WU67 409 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 TUBGCP3Q96CW5 907 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 PLPPR2Q96GM1 343 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 COX4I2Q96KJ9 171 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 HDHD5Q9BXW7 423 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 GSX2Q9BZM3 304 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 CXorf36Q9H7Y0 433 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 KLHL13Q9P2N7 655 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 DTNAQ9Y4J8 743 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
DUBR-204ENST00000490441 KLF4O43474 513 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 TMCC2O75069 709 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 NUDT17P0C025 328 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 UBL4AP11441 157 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 SHC1P29353 583 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 PTH2RP49190 550 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 SELENBP1Q13228 472 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 KLHL26Q53HC5 615 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 CBLN3Q6UW01 205 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 FCRLAQ7L513 359 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 SLC43A2Q8N370 569 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 KRTCAP2Q8N6L1 136 aa10.03□□□□□ -0.8
DUBR-204ENST00000490441 TOR1AIP2Q8NFQ8 470 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms