RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PHOSPHO1Q8TCT1 267 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZFP90Q8TF47 636 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 PPCDCQ96CD2 204 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 IQCGQ9H095 443 aaKnown RBP17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 CXorf36Q9H7Y0 433 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 PRSS50Q9UI38 385 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 ING1Q9UK53 422 aaPredicted RBP17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 IGHV3-15A0A0B4J1V0 119 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 NPIPB8E9PQR5 432 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 AKAP10O43572 662 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 TBX19O60806 448 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 SEC22BO75396 215 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 PRPH2P23942 346 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 EDNRAP25101 427 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 FRKP42685 505 aaPredicted RBP17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 OR3A2P47893 321 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 RNF144AP50876 292 aaPredicted RBP17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 NUDT6P53370 316 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 TMEM249Q2WGJ8 235 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZCCHC12Q6PEW1 402 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 TRMT10CQ7L0Y3 403 aaKnown RBP17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 SLC43A2Q8N370 569 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 ATP6V1C2Q8NEY4 427 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 OR10H5Q8NGA6 315 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 JADE3Q92613 823 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 METTL2AQ96IZ6 378 aaKnown RBP17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 PSD2Q9BQI7 771 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 REEP4Q9H6H4 257 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 L2HGDHQ9H9P8 463 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 BCO1Q9HAY6 547 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 NPAP1Q9NZP6 1156 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 CDC42EP3Q9UKI2 254 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 EMCNQ9ULC0 261 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 ICAM5Q9UMF0 924 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 PTGDR2Q9Y5Y4 395 aa17.21■□□□□ 0.35
SMPDL3A-202ENST00000487215 FAM234BA2RU67 622 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 G3V2L1 256 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 H3BQF6 201 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 KIF2AO00139 706 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 ABCD4O14678 606 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 NUDT14O95848 222 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 GSTA1P08263 222 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 IRX1P78414 480 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 POU6F2P78424 691 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 TOMM34Q15785 309 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 AGAP6Q5VW22 663 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 FRMD7Q6ZUT3 714 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 MTERF4Q7Z6M4 381 aaKnown RBP17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 IFT20Q8IY31 132 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 CCDC126Q96EE4 140 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 TSSK3Q96PN8 268 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 CCT7Q99832 543 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 BTBD2Q9BX70 525 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 CACNG6Q9BXT2 260 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 ACSS1Q9NUB1 689 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 GIN1Q9NXP7 522 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 SH3BP4Q9P0V3 963 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 KLHL9Q9P2J3 617 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 CARD8Q9Y2G2 431 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 ACTL7BQ9Y614 415 aa17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 GPC6Q9Y625 555 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3A-202ENST00000487215 NPIPA5A0A0B4J1W7 369 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 NPIPA7E9PJI5 369 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 RGS14O43566 566 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 HSPA4LO95757 839 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 NPIPA8P0DM63 369 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 PYGBP11216 843 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 PRKCAP17252 672 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 SDC1P18827 310 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 EFNA1P20827 205 aaPredicted RBP17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 P2RX1P51575 399 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 SUMO3P55854 103 aaPredicted RBP17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 PDE7AQ13946 482 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 TIMM23BQ5SRD1 257 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 CLEC2AQ6UVW9 174 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZYG11AQ6WRX3 759 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 ACMSDQ8TDX5 336 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 CDS1Q92903 461 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF524Q96C55 264 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 FAM120BQ96EK7 910 aaKnown RBP17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 FCRL1Q96LA6 429 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 ADAD1Q96M93 576 aaKnown RBP17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 TNFRSF13CQ96RJ3 184 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 C1orf109Q9NX04 203 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 FREM1Q5H8C1 2179 aa17.19■□□□□ 0.34
SMPDL3A-202ENST00000487215 GOLGA8QA0A0J9YX86 632 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 A0A1W2PNR3 127 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 GOLGA8OA6NCC3 632 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 GOLGA8NF8WBI6 632 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 C8BP07358 591 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 UROSP10746 265 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 MYL2P10916 166 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 COX5AP20674 150 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 IGHV1-2P23083 117 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 RAC3P60763 192 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 NAA20P61599 178 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 VLDLRP98155 873 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 LOXL1Q08397 574 aaPredicted RBP17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 SELENBP1Q13228 472 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms