RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 HSDL2Q6YN16 418 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 B3GNT6Q6ZMB0 384 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 RTL4Q6ZR62 310 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CAMKMTQ7Z624 323 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 GALNT7Q86SF2 657 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC22A16Q86VW1 577 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 THOC6Q86W42 341 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CNTN4Q8IWV2 1026 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF595Q8IYB9 648 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 RPRMLQ8N4K4 120 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NAT8LQ8N9F0 302 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 MORN4Q8NDC4 146 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 TTLQ8NG68 377 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 OR2M7Q8NG81 312 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 OR10Q1Q8NGQ4 319 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 OR8K3Q8NH51 312 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 TMEM163Q8TC26 289 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 ANKRD7Q92527 254 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NRGNQ92686 78 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 DAZLQ92904 295 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NCLNQ969V3 563 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 LINGO1Q96FE5 620 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 SMC6Q96SB8 1091 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NDNQ99608 321 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM173AQ9BQD7 235 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 AIF1LQ9BQI0 150 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 NAT9Q9BTE0 207 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 TMEM120AQ9BXJ8 343 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 TTTY12Q9BZ98 90 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 AICDAQ9GZX7 198 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 SPNS1Q9H2V7 528 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 RHBGQ9H310 441 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 IL1RL2Q9HB29 575 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 ADAP2Q9NPF8 381 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 PRTFDC1Q9NRG1 225 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 PNO1Q9NRX1 252 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 IARS2Q9NSE4 1012 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 PNPLA3Q9NST1 481 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 DEPPQ9NTK1 212 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 HPF1Q9NWY4 346 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 B4GALT7Q9UBV7 327 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF223Q9UK11 482 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CORO1CQ9ULV4 474 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 MRPS33Q9Y291 106 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 L3MBTL1Q9Y468 752 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 PCDHGB3Q9Y5G1 929 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CLDN16Q9Y5I7 305 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM215AQ9Y5M1 114 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 KCNE2Q9Y6J6 123 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CLCA3PQ9Y6N3 262 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 CSPG4Q6UVK1 2322 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 MED12LQ86YW9 2145 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF469Q96JG9 3925 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 HRNRQ86YZ3 2850 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 MED12Q93074 2177 aa3.61□□□□□ -1.83
SNRNP40-205ENST00000486941 ROS1P08922 2347 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 CTAGE15A4D2H0 777 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 LRIT2A6NDA9 550 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 SAC3D1A6NKF1 404 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HSPB2A8KAH6 182 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM166BA8MTA8 275 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 C4orf51C9J302 202 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 PRAC2D3DTV9 90 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 GOLGA8MH3BSY2 632 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 WWP2O00308 870 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 PRKNO60260 465 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HCN1O60741 890 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 OR6B1O95007 311 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 GUCA1CO95843 209 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 P04436 131 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 CCDC175P0C221 793 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 C1GALT1C1LP0DN25 315 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 GABRA1P14867 456 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 PGAM1P18669 254 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 GNAZP19086 355 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF10P21506 573 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 DNASE1P24855 282 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 PPP2R1BP30154 601 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HPDP32754 393 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 SOX3P41225 446 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 MAGEA5P43359 124 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HNMTP50135 292 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HNRNPFP52597 415 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 LIM2P55344 173 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 RAB38P57729 211 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 CDKL1Q00532 357 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 FOXO1Q12778 655 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 TBL3Q12788 808 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 CRYMQ14894 314 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC10A1Q14973 349 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 EFTUD2Q15029 972 aaKnown RBP eCLIP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 RBBP5Q15291 538 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HSPB2Q16082 182 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 KCTD19Q17RG1 926 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 ADPRMQ3LIE5 342 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 FBXL19-AS1Q494R0 122 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 TOR1AIP1Q5JTV8 583 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 SPANXN3Q5MJ09 141 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 C1orf185Q5T7R7 199 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 WLSQ5T9L3 541 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms