RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PIPP12273 146 aaPredicted RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 MATN1P21941 496 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 HNRNPA2B1P22626 353 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 CBLP22681 906 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ATP5A1P25705 553 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 APEX1P27695 318 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 AKT2P31751 481 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 POLR2IP36954 125 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 LUMP51884 338 aaPredicted RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 UGT2B15P54855 530 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 SNRPGP62308 76 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 CYP4F2P78329 520 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ILKQ13418 452 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 DGCR6Q14129 220 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ZNF846Q147U1 533 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 CLCA4Q14CN2 919 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 EXOC3L2Q2M3D2 409 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 TMEM196Q5HYL7 178 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ATAD3BQ5T9A4 648 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 MEDAGQ5VYS4 303 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 RNLSQ5VYX0 342 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 FCRL6Q6DN72 434 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 LAIR2Q6ISS4 152 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ZNF425Q6IV72 752 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 NIPAL1Q6NVV3 410 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ZNF852Q6ZMS4 543 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 LINC00696Q6ZRV3 163 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 IQCF2Q8IXL9 164 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ENTHD1Q8IYW4 607 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 SLC5A8Q8N695 610 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 HORMAD2Q8N7B1 307 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ACOT4Q8N9L9 421 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 MINDY2Q8NBR6 621 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 FAM46DQ8NEK8 389 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 OR10Q1Q8NGQ4 319 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 CNIH3Q8TBE1 160 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 KCNE4Q8WWG9 221 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 FGF14Q92915 247 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 EXOSC8Q96B26 276 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 TMEM19Q96HH6 336 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 COL21A1Q96P44 957 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 SIGLEC11Q96RL6 698 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 NAA11Q9BSU3 229 aaPredicted RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 COPS4Q9BT78 406 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 PINK1Q9BXM7 581 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 PRRG3Q9BZD7 231 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 UCK2Q9BZX2 261 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 POLR2J2Q9GZM3 115 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 POLR2J3Q9H1A7 115 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 NCOR1P1Q9H4R4 102 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 LDAHQ9H6V9 325 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 PLEKHA2Q9HB19 425 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 BARX1Q9HBU1 254 aaPredicted RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 ACOT13Q9NPJ3 140 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 LHX9Q9NQ69 397 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 FKBP14Q9NWM8 211 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 KLHL28Q9NXS3 571 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 DKK4Q9UBT3 224 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 PSORS1C1Q9UIG5 152 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 PPIEQ9UNP9 301 aaKnown RBP7.17□□□□□ -1.26
SNX13-208ENST00000482558 WDR37Q9Y2I8 494 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 SH3GLB1Q9Y371 365 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 ASB4Q9Y574 426 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 SPACA6W5XKT8 324 aa7.17□□□□□ -1.26
SNX13-208ENST00000482558 NUP214P35658 2090 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 A0A1W2PPW3 197 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 FEZF1A0PJY2 475 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 ZAR1LA6NP61 321 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 CTDSP2O14595 271 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 ZSCAN9O15535 394 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 ERI3O43414 337 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 AKAP8O43823 692 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 SLC28A2O43868 658 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 TMPRSS11DO60235 418 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 LCMT2O60294 686 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 CBFA2T3O75081 653 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 BCAS1O75363 584 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 WBP4O75554 376 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 UGT2B17O75795 530 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 DIRAS1O95057 198 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 KLF8O95600 359 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 LY86O95711 162 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SERPIND1P05546 499 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 BCHEP06276 602 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 CDK1P06493 297 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 CHRM5P08912 532 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 CYP4B1P13584 511 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SELLP14151 372 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 UGT2B10P36537 528 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 CASP3P42574 277 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 RABIFP47224 123 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 NCBP2P52298 156 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNX13-208ENST00000482558 CRISP1P54107 249 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 C21orf59P57076 290 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 GMFBP60983 142 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SKP1P63208 163 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 PPP1R8Q12972 351 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 HSPB3Q12988 150 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SLAMF1Q13291 335 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 HTR4Q13639 388 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms