RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ART3Q13508 389 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 TMEM44Q2T9K0 475 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 ARSKQ6UWY0 536 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 HMGN2P46Q86SG4 172 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 IFNEQ86WN2 208 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 ZZZ3Q8IYH5 903 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 OR52P1PQ8NH57 321 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 ECSITQ9BQ95 431 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 EXOSC3Q9NQT5 275 aaKnown RBP24.27■■□□□ 1.48
CCM2-211ENST00000478582 TAGLN3Q9UI15 199 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 SLC6A5Q9Y345 797 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 IFT52Q9Y366 437 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 NPIPA2E9PIF3 369 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 NPIPA3F8WFD2 350 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 BMP7P18075 431 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 CHMP24386 653 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 GCKP35557 465 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 B3GALT5-AS1P59052 145 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 CRYZQ08257 329 aaKnown RBP24.26■■□□□ 1.47
CCM2-211ENST00000478582 KRT72Q14CN4 511 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 ZSWIM7Q19AV6 140 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 NDUFAF6Q330K2 333 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 LIN52Q52LA3 116 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 SLC30A8Q8IWU4 369 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 OR5W2Q8NH69 310 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 ARL8BQ9NVJ2 186 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 ZNF232Q9UNY5 417 aa24.26■■□□□ 1.47
CCM2-211ENST00000478582 GPC6Q9Y625 555 aaPredicted RBP24.26■■□□□ 1.47
CCM2-211ENST00000478582 C7orf72A4D263 438 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 CLDN24A6NM45 220 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 LINC01387J3KSC0 135 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 PRRG2O14669 202 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 NUDT2P50583 147 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 PLAURQ03405 335 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 LARS2Q15031 903 aaKnown RBP24.25■■□□□ 1.47
CCM2-211ENST00000478582 C3AR1Q16581 482 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 VRK2Q86Y07 508 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 GPR119Q8TDV5 335 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 ABTB1Q969K4 478 aaPredicted RBP24.25■■□□□ 1.47
CCM2-211ENST00000478582 ZBTB8AQ96BR9 441 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 ZNF583Q96ND8 569 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 TIMP4Q99727 224 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 KLHDC3Q9BQ90 382 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 UGT2B28Q9BY64 529 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 MED17Q9NVC6 651 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 SH3BGRL2Q9UJC5 107 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 ACAD8Q9UKU7 415 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 ANGPT4Q9Y264 503 aa24.25■■□□□ 1.47
CCM2-211ENST00000478582 GMFGO60234 142 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 LINGO3P0C6S8 592 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 PABPC4LP0CB38 370 aaKnown RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 UBTFL6P0CB48 400 aaPredicted RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 PCGF2P35227 344 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 ZNF41P51814 821 aaPredicted RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 PCBP3P57721 371 aaKnown RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 EEF1A1P68104 462 aaKnown RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 CBFBQ13951 182 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 VMACQ2NL98 169 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 PLPPR5Q32ZL2 321 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 GXYLT1Q4G148 440 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 EMC4Q5J8M3 183 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 WLSQ5T9L3 541 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 RNF220Q5VTB9 566 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 MTFR2Q6P444 385 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 AAGABQ6PD74 315 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 KRT73Q86Y46 540 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 DOLPP1Q86YN1 238 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 GRAMD2AQ8IUY3 354 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 SLC15A3Q8IY34 581 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 CNOT9Q92600 299 aaKnown RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 REXO5Q96IC2 774 aaKnown RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 SFXN2Q96NB2 322 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 PIGQQ9BRB3 760 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 CACYBPQ9HB71 228 aaKnown RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 CMTM6Q9NX76 183 aa24.24■■□□□ 1.47
CCM2-211ENST00000478582 ZNF443Q9Y2A4 671 aaPredicted RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 RPH3AQ9Y2J0 694 aaPredicted RBP24.24■■□□□ 1.47
CCM2-211ENST00000478582 ZNF407Q9C0G0 2248 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 CDHR4A6H8M9 788 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 FAM47E-STBD1D6RA91 191 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 BCAS1O75363 584 aaPredicted RBP24.23■■□□□ 1.47
CCM2-211ENST00000478582 TPOP07202 933 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 ZNF17P17021 662 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 MRPL2Q5T653 305 aaKnown RBP24.23■■□□□ 1.47
CCM2-211ENST00000478582 ERICH5Q6P6B1 374 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 ZNF836Q6ZNA1 936 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 GTPBP8Q8N3Z3 284 aaPredicted RBP24.23■■□□□ 1.47
CCM2-211ENST00000478582 CCDC120Q96HB5 630 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 ZNF607Q96SK3 696 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 SPATA5L1Q9BVQ7 753 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 DNAJB12Q9NXW2 375 aaKnown RBP24.23■■□□□ 1.47
CCM2-211ENST00000478582 TNFRSF10DQ9UBN6 386 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 TINAGQ9UJW2 476 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 PRDM4Q9UKN5 801 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 VDAC3Q9Y277 283 aa24.23■■□□□ 1.47
CCM2-211ENST00000478582 PCNX3Q9H6A9 2034 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 OR2M5A3KFT3 312 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 ETV2O00321 342 aaPredicted RBP24.22■■□□□ 1.47
CCM2-211ENST00000478582 VEZF1Q14119 521 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 ZNF311Q5JNZ3 666 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms