RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 KAT7O95251 611 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 KLF8O95600 359 aaPredicted RBP4.65□□□□□ -1.66
CCDC39-204ENST00000476379 HLA-DPB1P04440 258 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 AKT2P31751 481 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SKP1P63208 163 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 RAE1P78406 368 aaKnown RBP4.65□□□□□ -1.66
CCDC39-204ENST00000476379 GPLD1P80108 840 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ST3GAL3Q11203 375 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 BTN1A1Q13410 526 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 KEAP1Q14145 624 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF181Q2M3W8 571 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SLC22A10Q63ZE4 541 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 TPGS2Q68CL5 300 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SLC36A4Q6YBV0 504 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 RFPL4BQ6ZWI9 263 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF765Q7L2R6 523 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF367Q7RTV3 350 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ARMC10Q8N2F6 343 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 TRAM1L1Q8N609 369 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ACBD4Q8NC06 268 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ST8SIA2Q92186 375 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SLC41A3Q96GZ6 507 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SEC22AQ96IW7 307 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 C5orf34Q96MH7 638 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 ASB16Q96NS5 453 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SPACA5Q96QH8 159 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 NUDT22Q9BRQ3 303 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SPATA5L1Q9BVQ7 753 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 TRIM2Q9C040 744 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 PARP12Q9H0J9 701 aaKnown RBP4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SEC61A2Q9H9S3 476 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 HHATLQ9HCP6 504 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 SLC52A3Q9NQ40 469 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 RCE1Q9Y256 329 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 IER3IP1Q9Y5U9 82 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 GREB1Q4ZG55 1949 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 PLCE1Q9P212 2302 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 AKAP13Q12802 2813 aa4.65□□□□□ -1.66
CCDC39-204ENST00000476379 TSPAN11A1L157 253 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 PRAMEF25A6NGN4 478 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 C17orf51A8MQB3 221 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 SLC16A6O15403 523 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 LALBAP00709 142 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 F10P00742 488 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 CHRM4P08173 479 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR8G3PP0DMU2 310 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 CALCBP10092 127 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 BMP8BP34820 402 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 PCGF2P35227 344 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 KIR2DL3P43628 341 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 PTH2RP49190 550 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 TAS2R38P59533 333 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 PPP1CAP62136 330 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 E2F1Q01094 437 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 MAB21L1Q13394 359 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 SNTB2Q13425 540 aaKnown RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 TBCEQ15813 527 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 MPEG1Q2M385 716 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 SLC25A35Q3KQZ1 300 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 SYT14P1Q58G82 188 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 AGAP7PQ5VUJ5 663 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR10K2Q6IF99 312 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 BMP8AQ7Z5Y6 402 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 GPAT4Q86UL3 456 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ADIPOR2Q86V24 386 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 GJD3Q8N144 294 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR2T33Q8NG76 320 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR4N2Q8NGD1 307 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR9A4Q8NGU2 314 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 AKAP1Q92667 903 aaKnown RBP eCLIP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ATOH1Q92858 354 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 RFT1Q96AA3 541 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 MMABQ96EY8 250 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 AHCYL2Q96HN2 611 aaKnown RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ADAD1Q96M93 576 aaKnown RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF582Q96NG8 517 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 TNFRSF13CQ96RJ3 184 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 NMNAT3Q96T66 252 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 BCL2L14Q9BZR8 327 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR52D1Q9H346 318 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 METTL17Q9H7H0 456 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ANKHQ9HCJ1 492 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 TCF7L1Q9HCS4 588 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ENOPH1Q9UHY7 261 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 POLHQ9Y253 713 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 SLC27A6Q9Y2P4 619 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 BACE2Q9Y5Z0 518 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 CENPBD1B2RD01 187 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 GPR89AB7ZAQ6 455 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 H3BML4 177 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 HMGN4O00479 90 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 FFAR1O14842 300 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 SPARCP09486 303 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 GPR89BP0CG08 455 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 CBSLP0DN79 551 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 RRASP10301 218 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 HOXB2P14652 356 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 HLA-DMAP28067 261 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 CMPK1P30085 196 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 CBSP35520 551 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms