RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MAPK11Q15759 364 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 C4orf17Q53FE4 359 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 ZNF311Q5JNZ3 666 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 MRPL2Q5T653 305 aaKnown RBP17.95■□□□□ 0.46
COL9A3-204ENST00000463487 VASNQ6EMK4 673 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 CBLN3Q6UW01 205 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 ZG16BQ96DA0 208 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 ARSGQ96EG1 525 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 MED17Q9NVC6 651 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 SH3BGRL2Q9UJC5 107 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 SLC13A4Q9UKG4 626 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 SLC5A6Q9Y289 635 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 ZNF443Q9Y2A4 671 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-204ENST00000463487 GPC6Q9Y625 555 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-204ENST00000463487 DNAJC13O75165 2243 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 ZNF407Q9C0G0 2248 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 PABPC4LP0CB38 370 aaKnown RBP17.94■□□□□ 0.46
COL9A3-204ENST00000463487 BMP7P18075 431 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 POU3F2P20265 443 aaPredicted RBP17.94■□□□□ 0.46
COL9A3-204ENST00000463487 ME2P23368 584 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 PCGF2P35227 344 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 GFRA1P56159 465 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 CRYZQ08257 329 aaKnown RBP17.94■□□□□ 0.46
COL9A3-204ENST00000463487 KRT72Q14CN4 511 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 ADRM1Q16186 407 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 PLPPR5Q32ZL2 321 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 GXYLT1Q4G148 440 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 C1QL3Q5VWW1 255 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 ZNF585AQ6P3V2 769 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 ARSKQ6UWY0 536 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 FGD2Q7Z6J4 655 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 PATL1Q86TB9 770 aaKnown RBP17.94■□□□□ 0.46
COL9A3-204ENST00000463487 PTOV1Q86YD1 416 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 CHERPQ8IWX8 916 aaKnown RBP17.94■□□□□ 0.46
COL9A3-204ENST00000463487 C10orf111Q8N326 155 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 GTPBP8Q8N3Z3 284 aaPredicted RBP17.94■□□□□ 0.46
COL9A3-204ENST00000463487 FAM71CQ8NEG0 241 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 REXO5Q96IC2 774 aaKnown RBP17.94■□□□□ 0.46
COL9A3-204ENST00000463487 TIMP4Q99727 224 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 UGT2B28Q9BY64 529 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 TINAGQ9UJW2 476 aa17.94■□□□□ 0.46
COL9A3-204ENST00000463487 CDHR4A6H8M9 788 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 B4DXG7 233 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 DNAJA2O60884 412 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 PEPDP12955 493 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 ADH6P28332 368 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 PRKAR1BP31321 381 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 EEFSECP57772 596 aaKnown RBP17.93■□□□□ 0.46
COL9A3-204ENST00000463487 MXRA7P84157 204 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 C3AR1Q16581 482 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 VMACQ2NL98 169 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 NDUFAF6Q330K2 333 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 ZNF550Q7Z398 422 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 HMGN2P46Q86SG4 172 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 VRK2Q86Y07 508 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 DOLPP1Q86YN1 238 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 ZZZ3Q8IYH5 903 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 OR2T12Q8NG77 320 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 OR5M9Q8NGP3 310 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 ZNF563Q8TA94 476 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 RASSF5Q8WWW0 418 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 ST8SIA1Q92185 356 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 RELTQ969Z4 430 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 MRGPRX4Q96LA9 322 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 GPATCH1Q9BRR8 931 aaKnown RBP17.93■□□□□ 0.46
COL9A3-204ENST00000463487 EVA1AQ9H8M9 152 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 SPAG4Q9NPE6 437 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 KLHL28Q9NXS3 571 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 CAMK2AQ9UQM7 478 aa17.93■□□□□ 0.46
COL9A3-204ENST00000463487 POLEQ07864 2286 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 GTF3C1Q12789 2109 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 OR2M5A3KFT3 312 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 CFAP73A6NFT4 308 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 AHRRA9YTQ3 701 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 FAM220BPB1ANY3 271 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 E9PLN8 166 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 CCL21O00585 134 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 LRRTM2O43300 516 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 AGFG2O95081 481 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 IFNA14P01570 189 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 LINGO3P0C6S8 592 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 CPN1P15169 458 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 ACVR2AP27037 513 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 ELK4P28324 431 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 AQP1P29972 269 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 VEZF1Q14119 521 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 QPRTQ15274 297 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 BCL2A1Q16548 175 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 TMEM211Q6ICI0 200 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 ZNF836Q6ZNA1 936 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 CHMP1BQ7LBR1 199 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 ARMC8Q8IUR7 673 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 GRAMD2AQ8IUY3 354 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 FAM26EQ8N5C1 309 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 MEIOBQ8N635 442 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 FITM2Q8N6M3 262 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 TNIP2Q8NFZ5 429 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 GPR119Q8TDV5 335 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 SLC26A7Q8TE54 656 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 SLC35B4Q969S0 331 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms