RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OTUB1Q96FW1 271 aaPredicted RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 RUBCNLQ9H714 662 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 SPRR3Q9UBC9 169 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 FBXL2Q9UKC9 423 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 ICAM5Q9UMF0 924 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 ZNF443Q9Y2A4 671 aaPredicted RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 KLF2Q9Y5W3 355 aaPredicted RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 LIPGQ9Y5X9 500 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 IGSF10Q6WRI0 2623 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 SYT5O00445 386 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 ADAM10O14672 748 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 ZIC3O60481 467 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 IL18BPO95998 194 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 ZNF708P17019 499 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 PGM1P36871 562 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 FUT5Q11128 374 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 SKP2Q13309 424 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 NSUN5P2Q63ZY6 315 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 GTF2IRD2BQ6EKJ0 949 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 ESPNLQ6ZVH7 1005 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 GTF2IRD2Q86UP8 949 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 MSRB3Q8IXL7 192 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 CLEC4FQ8N1N0 589 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 GPR119Q8TDV5 335 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 WNT2BQ93097 391 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 REXO5Q96IC2 774 aaKnown RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 TIMP4Q99727 224 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 TREX2Q9BQ50 279 aaPredicted RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 PINK1Q9BXM7 581 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 C12orf10Q9HB07 376 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 FANCFQ9NPI8 374 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 GLRX2Q9NS18 164 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 FLRT3Q9NZU0 649 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 DNPH1O43598 174 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 SYNGR4O95473 234 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 C8BP07358 591 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 TIMP3P35625 211 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 SLC25A35Q3KQZ1 300 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 MTDHQ86UE4 582 aaKnown RBP9.69□□□□□ -0.86
UBR4-208ENST00000459947 ZHX1-C8orf76Q96EF9 292 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 WDYHV1Q96HA8 205 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 POLR2J2Q9GZM3 115 aaKnown RBP9.69□□□□□ -0.86
UBR4-208ENST00000459947 POLR2J3Q9H1A7 115 aaKnown RBP9.69□□□□□ -0.86
UBR4-208ENST00000459947 FBXO34Q9NWN3 711 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 LRRTM2O43300 516 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 PGM3O95394 542 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 CCR4P51679 360 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 KRT72Q14CN4 511 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 ZNF585AQ6P3V2 769 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 APOOLQ6UXV4 268 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 GRINAQ7Z429 371 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 ZNF563Q8TA94 476 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 CCT8L2Q96SF2 557 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 CARD8Q9Y2G2 431 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 CFAP73A6NFT4 308 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 GMNNO75496 209 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 ZNF311Q5JNZ3 666 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 DESI1Q6ICB0 168 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 FGD2Q7Z6J4 655 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 RETREG3Q86VR2 466 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 AURKBQ96GD4 344 aaPredicted RBP9.69□□□□□ -0.86
UBR4-208ENST00000459947 KAT8Q9H7Z6 458 aaKnown RBP9.69□□□□□ -0.86
UBR4-208ENST00000459947 GP6Q9HCN6 339 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 SELENONQ9NZV5 590 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 TAGLN3Q9UI15 199 aa9.69□□□□□ -0.86
UBR4-208ENST00000459947 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
UBR4-208ENST00000459947 MCTS1Q9ULC4 181 aaKnown RBP9.69□□□□□ -0.86
UBR4-208ENST00000459947 OR2M5A3KFT3 312 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 FCMRO60667 390 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 CELA3AP09093 270 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 LINGO3P0C6S8 592 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 CHRNB4P30926 498 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 B3GALT5-AS1P59052 145 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 NCALDP61601 193 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 QPRTQ15274 297 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 CD226Q15762 336 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 ACSF3Q4G176 576 aaPredicted RBP9.68□□□□□ -0.86
UBR4-208ENST00000459947 C3orf33Q6P1S2 294 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 C16orf89Q6UX73 402 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 CCDC80Q76M96 950 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 GATSQ8NAP1 163 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 NFKBIDQ8NI38 313 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 SH3YL1Q96HL8 342 aaPredicted RBP9.68□□□□□ -0.86
UBR4-208ENST00000459947 TRIM2Q9C040 744 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 SLC6A5Q9Y345 797 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 WIPF3A6NGB9 483 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 FBP2O00757 339 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 LDLRP01130 860 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 IL2RAP01589 272 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 LHX2P50458 406 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 VMACQ2NL98 169 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 NANOGP8Q6NSW7 305 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 P4HA3Q7Z4N8 544 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 SLC26A7Q8TE54 656 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 NANOGQ9H9S0 305 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 SLC6A13Q9NSD5 602 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 RPS6KB2Q9UBS0 482 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 TESQ9UGI8 421 aaKnown RBP9.68□□□□□ -0.86
UBR4-208ENST00000459947 BAG5Q9UL15 447 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 DMXL2Q8TDJ6 3036 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms