RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GCM2O75603 506 aaPredicted RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CBR3O75828 277 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DXOO77932 396 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DKK1O94907 266 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PRSS23O95084 383 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 HMGN1P05114 100 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ALPLP05186 524 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 UMODP07911 640 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 FBXO45P0C2W1 286 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 GKN3PP0CG01 181 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 NPIPA8P0DM63 369 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TFPIP10646 304 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 IFI30P13284 250 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 POU2F1P14859 743 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CD46P15529 392 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TNFRSF1BP20333 461 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 RPS4Y1P22090 263 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PAICSP22234 425 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PRKACGP22612 351 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 RPL4P36578 427 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 APOBEC1P41238 236 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 EIF1P41567 113 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC1A3P43003 542 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 POLR2HP52434 150 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SMSP52788 366 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 AQP4P55087 323 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CLDN6P56747 220 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PRPS1P60891 318 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 RPS18P62269 152 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 EEF1A1P68104 462 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ARG2P78540 354 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 IL5RAQ01344 420 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 NPRL3Q12980 569 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 MFSD13AQ14CX5 517 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 RTP5Q14D33 572 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 NTRK2Q16620 822 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TMEM44Q2T9K0 475 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZIK1Q3SY52 487 aaPredicted RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ANKDD1AQ495B1 522 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ACER2Q5QJU3 275 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DCAF10Q5QP82 559 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PDSS1Q5T2R2 415 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 AP1ARQ63HQ0 302 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 HMBOX1Q6NT76 420 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ISLR2Q6UXK2 745 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 NPSR1Q6W5P4 371 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CCDC81Q6ZN84 652 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CHMP1BQ7LBR1 199 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TIPARPQ7Z3E1 657 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 GALNT5Q7Z7M9 940 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 HMGN2P46Q86SG4 172 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 MRGPREQ86SM8 312 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 OAFQ86UD1 273 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 MARCH3Q86UD3 253 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TSPYL5Q86VY4 417 aaPredicted RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 APLFQ8IW19 511 aaPredicted RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 LILRA2Q8N149 483 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC43A2Q8N370 569 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CLIP4Q8N3C7 705 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 LSMEM1Q8N8F7 131 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF321PQ8N8H1 164 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 GATSQ8NAP1 163 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TMEM178AQ8NBL3 297 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SIMC1Q8NDZ2 872 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 NFAM1Q8NET5 270 aaPredicted RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR4K5Q8NGD3 323 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR5W2Q8NH69 310 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 GRHL3Q8TE85 626 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DUSP19Q8WTR2 217 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TMEM239Q8WW34 195 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ST8SIA1Q92185 356 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PMEPA1Q969W9 287 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 GTPBP3Q969Y2 492 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZG16BQ96DA0 208 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 FAM122AQ96E09 287 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZHX1-C8orf76Q96EF9 292 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SH3YL1Q96HL8 342 aaPredicted RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 IMMP1LQ96LU5 166 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF597Q96LX8 424 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ADI1Q9BV57 179 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ASPNQ9BXN1 380 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 YTHDF1Q9BYJ9 559 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC19A3Q9BZV2 496 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 AKIRIN1Q9H9L7 192 aaPredicted RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 LIN28AQ9H9Z2 209 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CTPS2Q9NRF8 586 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PNPLA3Q9NST1 481 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ACER3Q9NUN7 267 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TBC1D23Q9NUY8 699 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CLN6Q9NWW5 311 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CHCHD3Q9NX63 227 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TAS2R10Q9NYW0 307 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DKKL1Q9UK85 242 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 BAIAP2Q9UQB8 552 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DTX4Q9Y2E6 619 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 MYRFQ9Y2G1 1151 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CARD8Q9Y2G2 431 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SSUH2Q9Y2M2 353 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TPRKBQ9Y3C4 175 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms