RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SHISA5Q8N114 240 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 LINC00528Q8N1L1 170 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 PARP8Q8N3A8 854 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 MEIOBQ8N635 442 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 CLEC18CQ8NCF0 446 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 OR52J3Q8NH60 311 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 KCNE4Q8WWG9 221 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 FEVQ99581 238 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 NUDT9Q9BW91 350 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 GABARAPL3Q9BY60 117 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 TRIM2Q9C040 744 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 QRSL1Q9H0R6 528 aaKnown RBP8.24□□□□□ -1.09
VPS50-207ENST00000458530 RIBC2Q9H4K1 309 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 TMEM27Q9HBJ8 222 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 FAM118AQ9NWS6 357 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 RPS6KB2Q9UBS0 482 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 PISDQ9UG56 409 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 BLOC1S6Q9UL45 172 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 PADI1Q9ULC6 663 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 A4GNTQ9UNA3 340 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 DTX4Q9Y2E6 619 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 MYRFQ9Y2G1 1151 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 PCDHGA3Q9Y5H0 932 aa8.24□□□□□ -1.09
VPS50-207ENST00000458530 LOC102723996A0A087X1L8 192 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 LOC100130705A0A1B0GUX0 176 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 SH3PXD2BA1X283 911 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 TRAPPC13A5PLN9 417 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 PRAMEF25A6NGN4 478 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 CPSF4LA6NMK7 179 aaKnown RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 CDRT15L2A8MXV6 281 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 NPIPB9F8W1W9 429 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 DLGAP1O14490 977 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 SLC16A6O15403 523 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 KLK10O43240 276 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 OR10H3O60404 316 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 CYP7B1O75881 506 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 CSTAP01040 98 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 LYNP07948 512 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 NGFRP08138 427 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 UBTFL6P0CB48 400 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 PRKACGP22612 351 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ADH7P40394 386 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 SLC6A8P48029 635 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 CLK3P49761 638 aaKnown RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 DAPP51397 102 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 PNLIPRP2P54317 469 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 COPZ1P61923 177 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 GABREP78334 506 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 COX10Q12887 443 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 PPP1R8Q12972 351 aaKnown RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 NPRL3Q12980 569 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 TOP3AQ13472 1001 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 NNATQ16517 81 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 LINC00303Q3SY05 128 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ZIK1Q3SY52 487 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 ENTPD8Q5MY95 495 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ZNF613Q6PF04 617 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 UGT2A3Q6UWM9 527 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ZNF517Q6ZMY9 492 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 SHISA6Q6ZSJ9 500 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 USP51Q70EK9 711 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 OLIG3Q7RTU3 272 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 THAP5Q7Z6K1 395 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 LACC1Q8IV20 430 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 MISPQ8IVT2 679 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 C9orf40Q8IXQ3 194 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 DEPDC4Q8N2C3 294 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 CLIP4Q8N3C7 705 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ESX1Q8N693 406 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 SLC5A8Q8N695 610 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 AQP11Q8NBQ7 271 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 GALNT6Q8NCL4 622 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 OR2Y1Q8NGV0 311 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 PIGXQ8TBF5 258 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 SLC22A8Q8TCC7 542 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ADAMTS16Q8TE57 1224 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ACOT11Q8WXI4 607 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 DIO2Q92813 273 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 ADIPOR1Q96A54 375 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 HS6ST2Q96MM7 605 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 CCNL2Q96S94 520 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 MBOAT4Q96T53 435 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 DGCR6LQ9BY27 220 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 PRRG3Q9BZD7 231 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 NXF5Q9H1B4 397 aaKnown RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 ZNF696Q9H7X3 374 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 TMEFF2Q9UIK5 374 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 TMEM5Q9Y2B1 443 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 PTRH2Q9Y3E5 179 aaKnown RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 GMPPBQ9Y5P6 360 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 MAGED1Q9Y5V3 778 aaPredicted RBP8.23□□□□□ -1.09
VPS50-207ENST00000458530 B3GALT1Q9Y5Z6 326 aa8.23□□□□□ -1.09
VPS50-207ENST00000458530 NPIPA5A0A0B4J1W7 369 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 TRBV11-1A0A0K0K1C0 115 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 A0A1W2PQD3 144 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 SERINC4A6NH21 518 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 NPIPA7E9PJI5 369 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 GTPBP1O00178 669 aaKnown RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 PEX12O00623 359 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 FFAR1O14842 300 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms