RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CD80P33681 288 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 RFC4P35249 363 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 ETV5P41161 510 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 QARSP47897 775 aaKnown RBP3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 ARHGDIAP52565 204 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 CD300CQ08708 224 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 CUL1Q13616 776 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 FASTKD3Q14CZ7 662 aaKnown RBP3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 SLC15A2Q16348 729 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 CYP51A1Q16850 503 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 MS4A18Q3C1V0 323 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 TMEM30BQ3MIR4 351 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 FAM199XQ6PEV8 388 aaPredicted RBP3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 USP43Q70EL4 1123 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 CEACAM19Q7Z692 300 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 EGFL6Q8IUX8 553 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR2L13Q8N349 312 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 C15orf54Q8N8G6 183 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR1L6Q8NGR2 347 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 KCNG3Q8TAE7 436 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 PEX13Q92968 403 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 SDSLQ96GA7 329 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 CELF6Q96J87 481 aaKnown RBP3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 COPS8Q99627 209 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 SLC39A3Q9BRY0 314 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 TUBGCP2Q9BSJ2 902 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 TRIM62Q9BVG3 475 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 FAM192AQ9GZU8 254 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 PSME2Q9UL46 239 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 KIAA1257Q9ULG3 409 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 MGAT4AQ9UM21 535 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 L3MBTL1Q9Y468 752 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 NPTNQ9Y639 398 aa3.36□□□□□ -1.87
HMGN3P1-201ENST00000453847 A0A075B6Q4 140 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 PP2D1A8MPX8 630 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 FOXI3A8MTJ6 420 aaPredicted RBP3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 DFNA5O60443 496 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 DIRAS1O95057 198 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 AGTP01019 485 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 MELTFP08582 738 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 HSD17B1P14061 328 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 ACADSP16219 412 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 IMPDH1P20839 514 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 LMO2P25791 158 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 SPRP35270 261 aaPredicted RBP3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 CAPGP40121 348 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 ALDH3B2P48448 385 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 CYLC2Q14093 348 aaPredicted RBP3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 LTB4RQ15722 352 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 DPYSL2Q16555 572 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 BEND3Q5T5X7 828 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 LGSNQ5TDP6 509 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 CARD17Q5XLA6 110 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 ARMCX5Q6P1M9 558 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 EMBQ6PCB8 327 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 CCDC73Q6ZRK6 1079 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 BIVMQ86UB2 503 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 SERPINA9Q86WD7 417 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 PSTKQ8IV42 348 aaKnown RBP3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 GTPBP8Q8N3Z3 284 aaPredicted RBP3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 Q8N9G6 341 aaPredicted RBP3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 C9orf106Q8NAJ2 232 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 TRPV1Q8NER1 839 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 FAF2Q96CS3 445 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 TIMD4Q96H15 378 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 C9orf85Q96MD7 179 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR5B2Q96R09 309 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 NARFLQ9H6Q4 476 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 EXO5Q9H790 373 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 ABCC13Q9NSE7 274 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 PAK1IP1Q9NWT1 392 aaPredicted RBP3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 EHFQ9NZC4 300 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 PDE10AQ9Y233 779 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 CA5BQ9Y2D0 317 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 MAD1L1Q9Y6D9 718 aa3.35□□□□□ -1.87
HMGN3P1-201ENST00000453847 ZNF840PA6NDX5 716 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 TRABD2BA6NFA1 517 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 DNAJB6O75190 326 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 VENTXO95231 258 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 HMGB2P26583 209 aaKnown RBP3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 GCAP28676 217 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 HMGCLP35914 325 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 GNPDA1P46926 289 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 RIDAP52758 137 aaKnown RBP3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 RND3P61587 244 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 VLDLRP98155 873 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 CDK16Q00536 496 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 ACY1Q03154 408 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 BST2Q10589 180 aaKnown RBP3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 PPIL2Q13356 520 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 CAVIN4Q5BKX8 364 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 DMRTC1Q5HYR2 192 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 OTUD3Q5T2D3 398 aaPredicted RBP3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR8G2PQ6IF36 304 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 KIAA1161Q6NSJ0 714 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 RNASEKQ6P5S7 137 aaKnown RBP3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 H2BFWTQ7Z2G1 175 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 PAQR7Q86WK9 346 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 NR2C2APQ86WQ0 139 aa3.34□□□□□ -1.87
HMGN3P1-201ENST00000453847 HPS6Q86YV9 775 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms