RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZBTB18Q99592 522 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 NPAS1Q99742 590 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 OR51I1Q9H343 314 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 LIME1Q9H400 295 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 TIGARQ9NQ88 270 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 THAP1Q9NVV9 213 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 ELOVL5Q9NYP7 299 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF226Q9NYT6 803 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 CLEC4AQ9UMR7 237 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 GPC6Q9Y625 555 aaPredicted RBP17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 HEATR5AQ86XA9 2040 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 PRSS51A0A1B0GVH4 220 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 FAM221AA4D161 298 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF264O43296 627 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 LINGO3P0C6S8 592 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 CD8BP10966 210 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 UQCRC2P22695 453 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 SLC6A8P48029 635 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 KHKP50053 298 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 MAGOHP61326 146 aaKnown RBP17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 CBFBQ13951 182 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 KEAP1Q14145 624 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 TESK1Q15569 626 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.81■□□□□ 0.442e-9■■□□□ 12.2
SHROOM1-204ENST00000440118 NXNQ6DKJ4 435 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 PAMR1Q6UXH9 720 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 FBXO27Q8NI29 283 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 ARL8AQ96BM9 186 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 GMPPAQ96IJ6 420 aaPredicted RBP17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 SDF2Q99470 211 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 SERHL2Q9H4I8 314 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 FANCFQ9NPI8 374 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 KLHL28Q9NXS3 571 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 TESMINQ9Y4I5 508 aa17.81■□□□□ 0.44
SHROOM1-204ENST00000440118 ITPR3Q14573 2671 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 GOLGA8QA0A0J9YX86 632 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 GOLGA8OA6NCC3 632 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 GOLGA8NF8WBI6 632 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 ADAMDEC1O15204 470 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 HDAC3O15379 428 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 OIP5O43482 229 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 PABPC4LP0CB38 370 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 PSMA4P25789 261 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 SLC7A1P30825 629 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 WDR4P57081 412 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 CARD18P57730 90 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 CTU2Q2VPK5 515 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 GTF2IRD2BQ6EKJ0 949 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 OGFOD2Q6N063 350 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 SPATA19Q7Z5L4 167 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 GTF2IRD2Q86UP8 949 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 STK32CQ86UX6 486 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 TRIML2Q8N7C3 387 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 CHDHQ8NE62 594 aaPredicted RBP17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 OR6K3Q8NGY3 331 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 POC1BQ8TC44 478 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 XAGE5Q8WWM1 108 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 SLC35A5Q9BS91 424 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 KLHL4Q9C0H6 718 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 NMUR2Q9GZQ4 415 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 MKLN1Q9UL63 735 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 ICAM5Q9UMF0 924 aa17.8■□□□□ 0.44
SHROOM1-204ENST00000440118 A0A0J9YW62 118 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 SERINC4A6NH21 518 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 C16orf97H3BN30 126 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 SDHDO14521 159 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 EIF4E2O60573 245 aaKnown RBP17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 CSTAP01040 98 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 RAF1P04049 648 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 OR12D1P0DN82 309 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 IL11P20809 199 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 ADH6P28332 368 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 UGT2B10P36537 528 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 ANXA11P50995 505 aaKnown RBP17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 ARHGAP11BQ3KRB8 267 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF474Q6S9Z5 364 aaPredicted RBP17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF610Q8N9Z0 462 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 OR5W2Q8NH69 310 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 OSTF1Q92882 214 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 ZC3HAV1LQ96H79 300 aaKnown RBP17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 ADGRG7Q96K78 797 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 PANX1Q96RD7 426 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 FOXC2Q99958 501 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 KLHDC3Q9BQ90 382 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 GLRX2Q9NS18 164 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 AIG1Q9NVV5 245 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 WDR45Q9Y484 360 aa17.79■□□□□ 0.44
SHROOM1-204ENST00000440118 C9JVG2 144 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 NPIPB9F8W1W9 429 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 SLCO1B7G3V0H7 640 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF195O14628 629 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 SS18L1O75177 396 aaPredicted RBP17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 HRGP04196 525 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 UBTFL6P0CB48 400 aaPredicted RBP17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 PRKCAP17252 672 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 EPHA3P29320 983 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 UFM1P61960 85 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 PPP2R2AP63151 447 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 SELENBP1Q13228 472 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 CASP8Q14790 479 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms