RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 MRPS35P82673 323 aaKnown RBP12.58□□□□□ -0.4
LINC01088-201ENST00000437737 KRT72Q14CN4 511 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 KIAA0040Q15053 153 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 LTB4RQ15722 352 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 CTU2Q2VPK5 515 aaKnown RBP12.58□□□□□ -0.4
LINC01088-201ENST00000437737 PDCD4Q53EL6 469 aaKnown RBP12.58□□□□□ -0.4
LINC01088-201ENST00000437737 IL23RQ5VWK5 629 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 GALNT18Q6P9A2 607 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 C6orf89Q6UWU4 347 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 DNM1P46Q6ZS02 220 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 BEND4Q6ZU67 534 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 CCDC121Q6ZUS5 278 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 STK32CQ86UX6 486 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 METTL4Q8N3J2 472 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 FITM2Q8N6M3 262 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 METTL25Q8N6Q8 603 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 ERP27Q96DN0 273 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 SHARPINQ9H0F6 387 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 SDR39U1Q9NRG7 319 aaPredicted RBP12.58□□□□□ -0.4
LINC01088-201ENST00000437737 AIG1Q9NVV5 245 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 LPAR3Q9UBY5 353 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 GDF2Q9UK05 429 aaPredicted RBP12.58□□□□□ -0.4
LINC01088-201ENST00000437737 GPR52Q9Y2T5 361 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 GPR55Q9Y2T6 319 aaPredicted RBP12.58□□□□□ -0.4
LINC01088-201ENST00000437737 PCDHA9Q9Y5H5 950 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 CAPN7Q9Y6W3 813 aa12.58□□□□□ -0.4
LINC01088-201ENST00000437737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 PCNX3Q9H6A9 2034 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 OR2M5A3KFT3 312 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 WIPF1O43516 503 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 HNRNPCL1O60812 293 aaKnown RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 GUCY1B2O75343 617 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 ASMTP46597 345 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 EIF1AXP47813 144 aaKnown RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 MAPK12P53778 367 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 PNLIPRP2P54317 469 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 GAS1P54826 345 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 CORO7P57737 925 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 SRSF2Q01130 221 aaKnown RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 STX5Q13190 355 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 GANABQ14697 944 aaKnown RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 ZSCAN26Q16670 478 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 TMEM249Q2WGJ8 235 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 NOXRED1Q6NXP6 359 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 FADS6Q8N9I5 356 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 GLB1L3Q8NCI6 653 aaPredicted RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 OR2M3Q8NG83 312 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 TSPEARQ8WU66 669 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 EFHD2Q96C19 240 aaPredicted RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 APIPQ96GX9 242 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 GMPPAQ96IJ6 420 aaPredicted RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 FCRL1Q96LA6 429 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 ZBTB18Q99592 522 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 CCDC106Q9BWC9 280 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 MRPL1Q9BYD6 325 aaKnown RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 ESRP2Q9H6T0 727 aaKnown RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 PTGES2Q9H7Z7 377 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 ZIM2Q9NZV7 527 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 MED11Q9P086 117 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 MCM8Q9UJA3 840 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 CES1P1Q9UKY3 287 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 GPR45Q9Y5Y3 372 aa12.57□□□□□ -0.4
LINC01088-201ENST00000437737 YLPM1P49750 1951 aaKnown RBP12.57□□□□□ -0.4
LINC01088-201ENST00000437737 IGHV4-30-2A0A087WSY4 118 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 GNG14A0A1W2PPG7 69 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 EIF1AYO14602 144 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 SLC22A3O75751 556 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 BCAS2O75934 225 aaPredicted RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 FESP07332 822 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 PRPS1L1P21108 318 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 TIA1P31483 386 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 EVI2BP34910 448 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 RPL3P39023 403 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 SLC6A8P48029 635 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 ALDH9A1P49189 494 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 RASSF2P50749 326 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 CLNS1AP54105 237 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 CASP9P55211 416 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 TRA2BP62995 288 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 MRPS22P82650 360 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 DUSP2Q05923 314 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 KLF10Q13118 480 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF672Q499Z4 452 aaPredicted RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 NCMAPQ5T1S8 102 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 FAM180BQ6P0A1 224 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 C1orf52Q8N6N3 182 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 STEAP2Q8NFT2 490 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 RP9Q8TA86 221 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 S100PBPQ96BU1 408 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 C11orf24Q96F05 449 aaPredicted RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 BTBD9Q96Q07 612 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 PRPF18Q99633 342 aaKnown RBP12.56□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF385DQ9H6B1 395 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 C12orf49Q9H741 205 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 FOLH1BQ9HBA9 442 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 NGBQ9NPG2 151 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 SDHAF3Q9NRP4 125 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms