RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 DGLUCYQ7Z3D6 616 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 OAFQ86UD1 273 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 GLCCI1Q86VQ1 547 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 CACUL1Q86Y37 369 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SLC43A2Q8N370 569 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 C12orf76Q8N812 135 aaPredicted RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 TEX19Q8NA77 164 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 KCT2Q8NC54 265 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 GALNT11Q8NCW6 608 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 PHOSPHO2Q8TCD6 241 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SLC2A12Q8TD20 617 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 FGF13Q92913 245 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SMIM10Q96HG1 83 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 THAP7Q9BT49 309 aaPredicted RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 WACQ9BTA9 647 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SLC17A9Q9BYT1 436 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 DPH1Q9BZG8 443 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 C6orf106Q9H6K1 298 aaPredicted RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 SYNPO2LQ9H987 977 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 ENAMQ9NRM1 1142 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 C14orf105Q9NVL8 296 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 MRPL39Q9NYK5 338 aaKnown RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 GDE1Q9NZC3 331 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 KCMF1Q9P0J7 381 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SERGEFQ9UGK8 458 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 IL20RAQ9UHF4 553 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 NUP50Q9UKX7 468 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 C19orf53Q9UNZ5 99 aaPredicted RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 PDE4DIPQ5VU43 2346 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 TBC1D3EA0A087X179 549 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 LOC102723532A0A0G2JNH3 316 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 LINC01553A4QN01 128 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 OR5K3A6NET4 321 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 B3GALT2O43825 422 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 ZNF780AO75290 641 aaPredicted RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 IFI6P09912 130 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 LAMP2P13473 410 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 CPMP14384 443 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 NID1P14543 1247 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 IGFALSP35858 605 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 PITPNBP48739 271 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SRP54P61011 504 aaKnown RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 GPR176Q14439 515 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 GPR68Q15743 365 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 EXOSC6Q5RKV6 272 aaKnown RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 GARNL3Q5VVW2 1013 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 PYHIN1Q6K0P9 492 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 PSRC1Q6PGN9 363 aaPredicted RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 CREB3L2Q70SY1 520 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 TMEM99Q8N816 258 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 TM4SF19Q96DZ7 209 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 STACQ99469 402 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SLC28A3Q9HAS3 691 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 DUSP22Q9NRW4 184 aa10.49□□□□□ -0.73
USP4-205ENST00000431357 SIRT4Q9Y6E7 314 aaPredicted RBP10.49□□□□□ -0.73
USP4-205ENST00000431357 A0A087WV62 115 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 A0A0G2JMP0 313 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 A0A0X1KG70 313 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 A0A1W2PQU0 124 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 PLOD3O60568 738 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 CPNE3O75131 537 aaKnown RBP10.48□□□□□ -0.73
USP4-205ENST00000431357 ZNF254O75437 659 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 LYPD3O95274 346 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 DHFRP00374 187 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 MAKP20794 623 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 TBXA2RP21731 343 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SHC1P29353 583 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 BMP8BP34820 402 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 WASP42768 502 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 CBX5P45973 191 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 FXYD6P3P58550 94 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ACTC1P68032 377 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ACTA1P68133 377 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 FOXK2Q01167 660 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ANGPT1Q15389 498 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 C2orf27AQ580R0 203 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 DCST2Q5T1A1 773 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SFXN4Q6P4A7 337 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 BMP8AQ7Z5Y6 402 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 MS4A15Q8N5U1 240 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 CDRT4Q8N9R6 151 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SLC37A3Q8NCC5 494 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 OR10H4Q8NGA5 316 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 OR4M2Q8NGB6 313 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 OR4E2Q8NGC2 313 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 DEDD2Q8WXF8 326 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 KISS1RQ969F8 398 aaPredicted RBP10.48□□□□□ -0.73
USP4-205ENST00000431357 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 OR2M4Q96R27 311 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 TEAD3Q99594 435 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 TIMP4Q99727 224 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 MKRN2Q9H000 416 aaKnown RBP10.48□□□□□ -0.73
USP4-205ENST00000431357 MCUBQ9NWR8 336 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 CLDND1Q9NY35 253 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 HAO2Q9NYQ3 351 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 DAPP1Q9UN19 280 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SLC35A3Q9Y2D2 325 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 MED31Q9Y3C7 131 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 NPFFR2Q9Y5X5 522 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 RIIAD1A6NNX1 92 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms