RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SLC22A31A6NKX4 558 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 RIIAD1A6NNX1 92 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 CHURC1-FNTBB4DL54 471 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 H3BQ06 376 aaPredicted RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 I3L1I5 382 aaPredicted RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 SOCS6O14544 535 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 AQP9O43315 295 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 HCRTR1O43613 425 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 NSA2O95478 260 aaKnown RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 MSL3P1P0C860 447 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 PTNP21246 168 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 TBXA2RP21731 343 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 SDC2P34741 201 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 RFX3P48380 749 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 EIF2B2P49770 351 aaKnown RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 MAZP56270 477 aaKnown RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 IGLV3-21P80748 117 aaPredicted RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 PSG6Q00889 435 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 FAM53BQ14153 422 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 ZNF322Q6U7Q0 402 aaPredicted RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 CMIPQ8IY22 773 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 ACBD7Q8N6N7 88 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 SPRYD4Q8WW59 207 aaPredicted RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 TXNDC15Q96J42 360 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 SDHCQ99643 169 aaPredicted RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 TM9SF2Q99805 663 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 RBCK1Q9BYM8 510 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 RERGLQ9H628 205 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 CAPN10Q9HC96 672 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 Q9N2J8 555 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 ATP13A2Q9NQ11 1180 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 SLC2A4RGQ9NR83 387 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 PRTFDC1Q9NRG1 225 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 HCN3Q9P1Z3 774 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 POLHQ9Y253 713 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 SIGLEC7Q9Y286 467 aa12.66□□□□□ -0.38
THBS3-202ENST00000428962 YARS2Q9Y2Z4 477 aaKnown RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 PRR23D1E9PI22 279 aaPredicted RBP12.65□□□□□ -0.38
THBS3-202ENST00000428962 SNPHO15079 494 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 PROS1P07225 676 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 PRR23D2P0DMB1 279 aaPredicted RBP12.65□□□□□ -0.38
THBS3-202ENST00000428962 SRFP11831 508 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 S1PR1P21453 382 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 CAPZA2P47755 286 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 EMDP50402 254 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 FXYD6P3P58550 94 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 FABP5Q01469 135 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 GPR50Q13585 617 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 ZNF141Q15928 474 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 ZNF791Q3KP31 576 aaPredicted RBP12.65□□□□□ -0.38
THBS3-202ENST00000428962 DGAT2L6Q6ZPD8 337 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 FAM181AQ8N9Y4 354 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 OR51G2Q8NGK0 314 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 OR13C2Q8NGS9 318 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 CNOT9Q92600 299 aaKnown RBP12.65□□□□□ -0.38
THBS3-202ENST00000428962 KIAA1143Q96AT1 154 aaPredicted RBP12.65□□□□□ -0.38
THBS3-202ENST00000428962 VSTM2LQ96N03 204 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 ORAI3Q9BRQ5 295 aa12.65□□□□□ -0.38
THBS3-202ENST00000428962 PELOQ9BRX2 385 aaKnown RBP12.65□□□□□ -0.38
THBS3-202ENST00000428962 PLEKHB1Q9UF11 243 aaPredicted RBP12.65□□□□□ -0.38
THBS3-202ENST00000428962 A0A1B0GWA3 101 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 FAM183AA6NL82 134 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 J3QRE1 110 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 CASKO14936 926 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 ZNF749O43361 778 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 CSF2P04141 144 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 NME1P15531 152 aaKnown RBP12.65□□□□□ -0.39
THBS3-202ENST00000428962 ZNF3P17036 446 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 CFL1P23528 166 aaKnown RBP12.65□□□□□ -0.39
THBS3-202ENST00000428962 CD79BP40259 229 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 MLLT3P42568 568 aaPredicted RBP12.65□□□□□ -0.39
THBS3-202ENST00000428962 PPP3R1P63098 170 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 FOXK2Q01167 660 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 CBX3Q13185 183 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 FGFBP1Q14512 234 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 DESI1Q6ICB0 168 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 ARHGAP11AQ6P4F7 1023 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 CCBE1Q6UXH8 406 aaPredicted RBP12.65□□□□□ -0.39
THBS3-202ENST00000428962 ZAR1Q86SH2 424 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 SHISA5Q8N114 240 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 SIRT6Q8N6T7 355 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 LSMEM1Q8N8F7 131 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 OR4C6Q8NH72 309 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 HPS1Q92902 700 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 NACC2Q96BF6 587 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 PEX11GQ96HA9 241 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 SLC38A3Q99624 504 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 ZNF649Q9BS31 505 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 KATNB1Q9BVA0 655 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 SRRQ9GZT4 340 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 SYNDIG1Q9H7V2 258 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 ABCB9Q9NP78 766 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.39
THBS3-202ENST00000428962 RPS6KB2Q9UBS0 482 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 PLCL2Q9UPR0 1127 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 SLC35A3Q9Y2D2 325 aa12.65□□□□□ -0.39
THBS3-202ENST00000428962 TMEM131Q92545 1883 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 IGHV1OR15-9A0A0B4J2B8 117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms