RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 GOLGA8RI6L899 631 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 ABCD4O14678 606 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 AKAP10O43572 662 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 SEC22BO75396 215 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 GSTA1P08263 222 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 ENPP1P22413 925 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZNF385BQ569K4 471 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZFP90Q8TF47 636 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 PPCDCQ96CD2 204 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 CHMP6Q96FZ7 201 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 TNFRSF13CQ96RJ3 184 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 CACNG6Q9BXT2 260 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 COQ10BQ9H8M1 238 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 L2HGDHQ9H9P8 463 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 NTMQ9P121 344 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 KLHL9Q9P2J3 617 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 PRSS50Q9UI38 385 aa16.21■□□□□ 0.19
UPK3BP1-201ENST00000428678 SVEP1Q4LDE5 3571 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 A0A096LNT2 108 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 OIP5O43482 229 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 PYGBP11216 843 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 SLC7A1P30825 629 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 OR3A2P47893 321 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 ETF1P62495 437 aaKnown RBP16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 IRX1P78414 480 aaPredicted RBP16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 POU6F2P78424 691 aaPredicted RBP16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 OR10H5Q8NGA6 315 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 AMBRA1Q9C0C7 1298 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 CXorf36Q9H7Y0 433 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 GIN1Q9NXP7 522 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 NPAP1Q9NZP6 1156 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 SH3BP4Q9P0V3 963 aa16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 GPC6Q9Y625 555 aaPredicted RBP16.2■□□□□ 0.18
UPK3BP1-201ENST00000428678 MALRD1Q5VYJ5 2156 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 C9JVG2 144 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 KIF2AO00139 706 aaPredicted RBP16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 HSPA4LO95757 839 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 EFNA1P20827 205 aaPredicted RBP16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 ATP6V1C1P21283 382 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 CASP9P55211 416 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 DSCR9P59020 149 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 VLDLRP98155 873 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 KRTAP24-1Q3LI83 254 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 CBLN3Q6UW01 205 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 LRIG3Q6UXM1 1119 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 MTERF4Q7Z6M4 381 aaKnown RBP16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF527Q8NB42 609 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 HTRA1Q92743 480 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF775Q96BV0 537 aaPredicted RBP16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF764Q96H86 408 aaPredicted RBP16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 PSD2Q9BQI7 771 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 BTBD2Q9BX70 525 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 REEP4Q9H6H4 257 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 BCO1Q9HAY6 547 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 POU2F3Q9UKI9 436 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 CARD8Q9Y2G2 431 aa16.19■□□□□ 0.18
UPK3BP1-201ENST00000428678 NPIPA5A0A0B4J1W7 369 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 A0A1W2PNR3 127 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 NPIPA7E9PJI5 369 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 H3BNH8 94 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 GTPBP1O00178 669 aaKnown RBP16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 RGS14O43566 566 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 NPIPA8P0DM63 369 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 MYL2P10916 166 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 GGT1P19440 569 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 GCAP28676 217 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 P2RX1P51575 399 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 RAC3P60763 192 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 LOXL1Q08397 574 aaPredicted RBP16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 RASGEF1BQ0VAM2 473 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 KIAA0040Q15053 153 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 RAB35Q15286 201 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 TOMM34Q15785 309 aaPredicted RBP16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 TIMM23BQ5SRD1 257 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZCCHC12Q6PEW1 402 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 FRMD7Q6ZUT3 714 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 C17orf53Q8N3J3 647 aaPredicted RBP16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 CLHC1Q8NHS4 586 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 CDS1Q92903 461 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 CCDC126Q96EE4 140 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 METTL2AQ96IZ6 378 aaKnown RBP16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 TSSK3Q96PN8 268 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 MANSC1Q9H8J5 431 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 TNFRSF12AQ9NP84 129 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 ACSS1Q9NUB1 689 aaPredicted RBP16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 C1orf109Q9NX04 203 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 LPAR3Q9UBY5 353 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 ING1Q9UK53 422 aaPredicted RBP16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 CCL27Q9Y4X3 112 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 PTGDR2Q9Y5Y4 395 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 ACTL7BQ9Y614 415 aa16.18■□□□□ 0.18
UPK3BP1-201ENST00000428678 H3BQF6 201 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 HAX1O00165 279 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 PRKCAP17252 672 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 SDC1P18827 310 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 IGHV1-2P23083 117 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 EDNRAP25101 427 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 TTKP33981 857 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms