RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CRELD1Q96HD1 420 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 NAA11Q9BSU3 229 aaPredicted RBP9.94□□□□□ -0.82
TCOF1-204ENST00000427724 WACQ9BTA9 647 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 NTMT1Q9BV86 223 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 CHIAQ9BZP6 476 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 RACGAP1Q9H0H5 632 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 OR51E2Q9H255 320 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 RANGRFQ9HD47 186 aaPredicted RBP9.94□□□□□ -0.82
TCOF1-204ENST00000427724 RPL36Q9Y3U8 105 aaKnown RBP9.94□□□□□ -0.82
TCOF1-204ENST00000427724 CSNK1G3Q9Y6M4 447 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 NR2C1P13056 603 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 BCL6P41182 706 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 ACVR1Q04771 509 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 EEF1A1P5Q5VTE0 462 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 ZCCHC12Q6PEW1 402 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 OAFQ86UD1 273 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 GPR137CQ8N3F9 429 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 MUL1Q969V5 352 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 ZPBPQ9BS86 351 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 DEFB127Q9H1M4 99 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 NPIPA5A0A0B4J1W7 369 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 TCRBV5S2A0A599 114 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 NPIPA7E9PJI5 369 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 CTDSP2O14595 271 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 NUPL2O15504 423 aaKnown RBP9.94□□□□□ -0.82
TCOF1-204ENST00000427724 CYB5AP00167 134 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 NPIPA8P0DM63 369 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 MYBPHQ13203 477 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 AQP6Q13520 282 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 LIMS2Q7Z4I7 341 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 UBE2Q1Q7Z7E8 422 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 LYSMD2Q8IV50 215 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 SNX33Q8WV41 574 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 ASB12Q8WXK4 309 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 TEX101Q9BY14 249 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 TMEM45AQ9NWC5 275 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 KLHL42Q9P2K6 505 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 ROS1P08922 2347 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 IGHV1OR21-1A0A087WYE8 117 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 MEIOCA2RUB1 952 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ATXN7O15265 892 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 KDM4BO94953 1096 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 OR5F1O95221 314 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 DDAH2O95865 285 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 UQCRC2P22695 453 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ERP29P30040 261 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 E2F2Q14209 437 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 CTU2Q2VPK5 515 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 GARNL3Q5VVW2 1013 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 SLC22A10Q63ZE4 541 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF595Q8IYB9 648 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 TXNDC15Q96J42 360 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 MAPKAP1Q9BPZ7 522 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 CPPED1Q9BRF8 314 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 PPIL3Q9H2H8 161 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ACOT13Q9NPJ3 140 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 GRIP1Q9Y3R0 1128 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 TAPBPO15533 448 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 TGFBR1P36897 503 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 DNASE1L1P49184 302 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 DAPP51397 102 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF81P51508 661 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 EEF1A1P68104 462 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 MFSD9Q8NBP5 474 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 BEX1Q9HBH7 125 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 SMURF1Q9HCE7 757 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 HSPE1-MOB4S4R3N1 261 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 IL32P24001 234 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 PKLRP30613 574 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 C9orf135Q5VTT2 229 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 IZUMO1Q8IYV9 350 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 OR10H4Q8NGA5 316 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 OR51A7Q8NH64 312 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 PCNPQ8WW12 178 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 MOAP1Q96BY2 351 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 PDLIM5Q96HC4 596 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 LYSMD1Q96S90 227 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 SLA2Q9H6Q3 261 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 TEX10Q9NXF1 929 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 LRFN1Q9P244 771 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 SLC17A4Q9Y2C5 497 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 OR51B4Q9Y5P0 310 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 MYO18BQ8IUG5 2567 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 SULT2B1O00204 365 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 SCAMP2O15127 329 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 S100A9P06702 114 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 CAPZA1P52907 286 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 SMUG1Q53HV7 270 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 LIPKQ5VXJ0 399 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 CDRT4Q8N9R6 151 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 TP53I13Q8NBR0 393 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 PROKR2Q8NFJ6 384 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 OR52P1PQ8NH57 321 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ZC3HAV1LQ96H79 300 aaKnown RBP9.93□□□□□ -0.82
TCOF1-204ENST00000427724 NLKQ9UBE8 527 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 PFDN2Q9UHV9 154 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF225Q9UK10 706 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 LIPT1Q9Y234 373 aa9.93□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF638Q14966 1978 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms