RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 SCDO00767 359 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 DNAJA2O60884 412 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 RAMP1O60894 148 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 GLRA3O75311 464 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 ADAP00813 363 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 ALOX5P09917 674 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 PABPC4LP0CB38 370 aaKnown RBP13.28□□□□□ -0.28
ATG4B-209ENST00000425239 PRKCAP17252 672 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 EFNA1P20827 205 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-209ENST00000425239 ME2P23368 584 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 IDUAP35475 653 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 ITGADQ13349 1161 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 P2RY6Q15077 328 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 TMEM201Q5SNT2 666 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 PDSS1Q5T2R2 415 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 FCRLAQ7L513 359 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 HIPK1Q86Z02 1210 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 CLHC1Q8NHS4 586 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 CDS1Q92903 461 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 MTERF3Q96E29 417 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 PSD2Q9BQI7 771 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 TRAF4Q9BUZ4 470 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-209ENST00000425239 CXorf36Q9H7Y0 433 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 ANKZF1Q9H8Y5 726 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 GPATCH2Q9NW75 528 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 ATP6V1HQ9UI12 483 aa13.28□□□□□ -0.28
ATG4B-209ENST00000425239 GOLGA8QA0A0J9YX86 632 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 GOLGA8OA6NCC3 632 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 SHISA9B4DS77 424 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 GOLGA8NF8WBI6 632 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 AZIN1O14977 448 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 RGS14O43566 566 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 HSPA4LO95757 839 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 CD3EP07766 207 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 FGF4P08620 206 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 LINC00032P0C843 101 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 BCKDHAP12694 445 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 CPA3P15088 417 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 OR3A2P47893 321 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 RNF144AP50876 292 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 P2RX1P51575 399 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 POU6F2P78424 691 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 DMTNQ08495 405 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 TMEM176BQ3YBM2 270 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 CCDC153Q494R4 210 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 KANK2Q63ZY3 851 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 ALKBH2Q6NS38 261 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 LRIG3Q6UXM1 1119 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 Q6ZT83 130 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 DTX2Q86UW9 622 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 TDRPQ86YL5 185 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 COX18Q8N8Q8 333 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 KBTBD8Q8NFY9 601 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 ZFP28Q8NHY6 868 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 TRMT61AQ96FX7 289 aaKnown RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 GATA5Q9BWX5 397 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 ESRP2Q9H6T0 727 aaKnown RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 GDF2Q9UK05 429 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 CARD8Q9Y2G2 431 aa13.27□□□□□ -0.29
ATG4B-209ENST00000425239 GPC6Q9Y625 555 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-209ENST00000425239 NPIPA5A0A0B4J1W7 369 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 NPIPA7E9PJI5 369 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 CLOCKO15516 846 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 TLX2O43763 284 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-209ENST00000425239 CD5LO43866 347 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 ADAM11O75078 769 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 PGM3O95394 542 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 SHBGP04278 402 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 NPIPA8P0DM63 369 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 LAMP1P11279 417 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 HPGDP15428 266 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 RAC3P60763 192 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 VEZF1Q14119 521 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 LASP1Q14847 261 aaKnown RBP13.26□□□□□ -0.29
ATG4B-209ENST00000425239 NDUFAF6Q330K2 333 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 LIPMQ5VYY2 423 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 CDC73Q6P1J9 531 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 C10orf107Q8IVU9 208 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF619Q8N2I2 560 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 CEP112Q8N8E3 955 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 BANPQ8N9N5 519 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 MNS1Q8NEH6 495 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 OR7A2PQ8NGA2 310 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 PHOSPHO1Q8TCT1 267 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 ZFP90Q8TF47 636 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 TACO1Q9BSH4 297 aaKnown RBP13.26□□□□□ -0.29
ATG4B-209ENST00000425239 IQCGQ9H095 443 aaKnown RBP13.26□□□□□ -0.29
ATG4B-209ENST00000425239 TIGARQ9NQ88 270 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 NPAP1Q9NZP6 1156 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 PRSS50Q9UI38 385 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 KCNE5Q9UJ90 142 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 TMED5Q9Y3A6 229 aa13.26□□□□□ -0.29
ATG4B-209ENST00000425239 IGHV3-15A0A0B4J1V0 119 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 TMEM233B4DJY2 109 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 SMAD9O15198 467 aaKnown RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 GPRIN2O60269 458 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 CRCPO75575 148 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 NTF4P34130 210 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 CCT5P48643 541 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms