RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SSR4P51571 173 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 PIN1Q13526 163 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 SF3A2Q15428 464 aaKnown RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF791Q3KP31 576 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 LDLRAD1Q5T700 205 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 MS4A15Q8N5U1 240 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM239Q8WW34 195 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 BTBD2Q9BX70 525 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 FAIMQ9NVQ4 179 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 C5P01031 1676 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 KDM3BQ7LBC6 1761 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 BLACEA4D250 179 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 S100A7P31151 101 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 IDUAP35475 653 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 FAM189BP81408 668 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 OR8B8Q15620 311 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 VASNQ6EMK4 673 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 PSMF1Q92530 271 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 OR6C2Q9NZP2 312 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 EMC9Q9Y3B6 208 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 PDE7AQ13946 482 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 RGNQ15493 299 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ADIPOR2Q86V24 386 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 FAM217AQ8IXS0 508 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 OR4K5Q8NGD3 323 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 OR11L1Q8NGX0 322 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 L3HYPDHQ96EM0 354 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TSNAXQ99598 290 aaKnown RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 INIPQ9NRY2 104 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 CBLCQ9ULV8 474 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF337Q9Y3M9 751 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TCN2P20062 427 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TAS2R20P59543 309 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ERVK-25P63136 954 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 MOGQ16653 247 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 PARS2Q7L3T8 475 aaKnown RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ABCG5Q9H222 651 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TM7SF3Q9NS93 570 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 SPO11Q9Y5K1 396 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 LRP6O75581 1613 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 H7C2Y5 167 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 OSMP13725 252 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 PTGER4P35408 488 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 STT3AP46977 705 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 SIRPAP78324 504 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 NFATC4Q14934 902 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 MICAQ29983 383 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TP53I3Q53FA7 332 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF845Q96IR2 970 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF317Q96PQ6 595 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 VRK1Q99986 396 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 ULBP2Q9BZM5 246 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 APMAPQ9HDC9 416 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 PRMT8Q9NR22 394 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-205ENST00000418258 CA5BQ9Y2D0 317 aa10.54□□□□□ -0.72
PTCH1-205ENST00000418258 AQP2P41181 271 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 PRAMEF20Q5VT98 475 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 STEAP3Q658P3 488 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 NETO1Q8TDF5 533 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF775Q96BV0 537 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 NDUFAF4Q9P032 175 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 AK6Q9Y3D8 172 aaKnown RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 MIA3Q5JRA6 1907 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SERPINA7P05543 415 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 FBXO45P0C2W1 286 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SEC61A1P61619 476 aaKnown RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SFRP4Q6FHJ7 346 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 S100A7AQ86SG5 101 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 ISCA2Q86U28 154 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF420Q8TAQ5 688 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 MICU1Q9BPX6 476 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM246Q9BRR3 403 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 hCG_1809904A0A1W2PP81 198 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 A0A1W2PPE2 198 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 A0A1W2PR64 198 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 A0A1W2PRV1 198 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 DVL2O14641 736 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 EXOSC6Q5RKV6 272 aaKnown RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 OR52W1Q6IF63 320 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 OPN5Q6U736 354 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 MKXQ8IYA7 352 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 CTRCQ99895 268 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 TESQ9UGI8 421 aaKnown RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 FRS3O43559 492 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 TYROBPO43914 113 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM11P17152 192 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 PRSS3P35030 304 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 ARHGAP19Q14CB8 494 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 WBP2NLQ6ICG8 309 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM71Q6P5X7 295 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 GPR26Q8NDV2 337 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 MDGA1Q8NFP4 955 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SPIN2AQ99865 258 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SPIN2BQ9BPZ2 258 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 ANTXRLA6NF34 631 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 RNASET2O00584 256 aaKnown RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 CRHBPP24387 322 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 DNASE1P24855 282 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms