RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 OLFML2AQ68BL7 652 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 VASNQ6EMK4 673 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 C3orf33Q6P1S2 294 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 TRIM40Q6P9F5 258 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 SYT12Q8IV01 421 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 NAGSQ8N159 534 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 C2orf15Q8WU43 125 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 SMAP2Q8WU79 429 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 SMIM4Q8WVI0 70 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 GTF3AQ92664 365 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 PCED1BQ96HM7 432 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF354BQ96LW1 612 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 COPS8Q99627 209 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 SEMA3CQ99985 751 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 POLR2J3Q9H1A7 115 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 CACYBPQ9HB71 228 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 UFSP2Q9NUQ7 469 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 WWOXQ9NZC7 414 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 METTL1Q9UBP6 276 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 CLCA2Q9UQC9 943 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 CCL26Q9Y258 94 aa9.93□□□□□ -0.82
NIF3L1-204ENST00000409357 DOCK4Q8N1I0 1966 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 A0A0D9SG52 128 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 SCAMP2O15127 329 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 PCDH7O60245 1069 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 EIF4E2O60573 245 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 IFNGP01579 166 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 CBSLP0DN79 551 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 COX7A2P14406 83 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 GSTM3P21266 225 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 CNR1P21554 472 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 PAICSP22234 425 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 MST1P26927 711 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 PCSK1P29120 753 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 CBSP35520 551 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 MNDAP41218 407 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC1A3P43003 542 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 GCGRP47871 477 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 PSMA6P60900 246 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 MAXP61244 160 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 CXADRP78310 365 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 E2F1Q01094 437 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 IL10RAQ13651 578 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 C18orf21Q32NC0 220 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 ENTPD8Q5MY95 495 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 DNLZQ5SXM8 178 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 DCST1Q5T197 706 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 GPRIN1Q7Z2K8 1008 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 FAM122BQ7Z309 247 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC9B2Q86UD5 537 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 LDLRAD3Q86YD5 345 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 SPATA2LQ8IUW3 424 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 KLHL36Q8N4N3 616 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 FBXO15Q8NCQ5 510 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 OR11G2Q8NGC1 345 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 OR4K2Q8NGD2 314 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 OR14A16Q8NHC5 309 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 GATAD2BQ8WXI9 593 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 RFKQ969G6 155 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 HMCESQ96FZ2 354 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 DMRTA2Q96SC8 542 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 KCNK17Q96T54 332 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC46A2Q9BY10 475 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 ZDHHC5Q9C0B5 715 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 BHLHE41Q9C0J9 482 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 TINAGL1Q9GZM7 467 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC38A1Q9H2H9 487 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF768Q9H5H4 540 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 TRPV4Q9HBA0 871 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 ASH2LQ9UBL3 628 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 ANGPT4Q9Y264 503 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 PCDHB9Q9Y5E1 797 aa9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 PTPRZ1P23471 2315 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-204ENST00000409357 DISC1C4P0D8 188 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 CREBL2O60519 120 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 PRAMEF11O60813 436 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 KDM4BO94953 1096 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 CPSF4O95639 269 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 RECKO95980 971 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 F11P03951 625 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SPP1P10451 314 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SELLP14151 372 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 POU2F1P14859 743 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 EPORP19235 508 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 ELAVL4P26378 380 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 GDI1P31150 447 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 EIF2S3P41091 472 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 MTNR1AP48039 350 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SMSP52788 366 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 MRPS10P82664 201 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 CDK6Q00534 326 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 TRAM2Q15035 370 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 MLF2Q15773 248 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SPDYE7PQ495Y7 208 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SGO1Q5FBB7 561 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SFRP5Q5T4F7 317 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 IDNKQ5T6J7 187 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 OR2G6Q5TZ20 316 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 TXNDC8Q6A555 127 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms