RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PDHXO00330 501 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 FOXE1O00358 373 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 MED7O43513 233 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 CA1P00915 261 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 NPPAP01160 153 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 HSD17B1P14061 328 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 POU2F1P14859 743 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 ATP5A1P25705 553 aaKnown RBP3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 LMO2P25791 158 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 ETV1P50549 477 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 SEC61GP60059 68 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 BST1Q10588 318 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 TMEM44Q2T9K0 475 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 TIGITQ495A1 244 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 VWA2Q5GFL6 755 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 WSCD1Q658N2 575 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 REP15Q6BDI9 236 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAHD2BQ6P2I3 314 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 KCNIP4Q6PIL6 250 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 ANGPTL8Q6UXH0 198 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 LRRTM1Q86UE6 522 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 IFNEQ86WN2 208 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 CDR2LQ86X02 465 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 RNF130Q86XS8 419 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAM9CQ8IZT9 166 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 C15orf54Q8N8G6 183 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 CCDC26Q8TAB7 109 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 AENQ8WTP8 325 aaKnown RBP3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 LRRC45Q96CN5 670 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAHD2AQ96GK7 314 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 PLIN2Q99541 437 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 ATF6BQ99941 703 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 TUBGCP2Q9BSJ2 902 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 NCOR1P1Q9H4R4 102 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 GLRX2Q9NS18 164 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAM120CQ9NX05 1096 aaKnown RBP3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 ADAM28Q9UKQ2 775 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 MEMO1Q9Y316 297 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 TMED5Q9Y3A6 229 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 TTC21BQ7Z4L5 1316 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 LRP5LA4QPB2 252 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 GOLGA8OA6NCC3 632 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR6C65A6NJZ3 312 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 E9PBE3 544 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 GOLGA8NF8WBI6 632 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 TIMM8AO60220 97 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 POP4O95707 220 aaKnown RBP3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 TSPAN12O95859 305 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 SLC2A3P11169 496 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 PVRP15151 417 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 SDC1P18827 310 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 NCF2P19878 526 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 MX1P20591 662 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 UGT1A5P35504 534 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR1G1P47890 313 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 ARHGDIAP52565 204 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 SUCLG1P53597 346 aaKnown RBP3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 RAB40BQ12829 278 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 STK11Q15831 433 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 C14orf28Q4W4Y0 310 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 C9orf66Q5T8R8 295 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 LGSNQ5TDP6 509 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 ARMCX5Q6P1M9 558 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 CLEC2AQ6UVW9 174 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 NANOGNBQ7Z5D8 188 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAM228AQ86W67 206 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 BBS5Q8N3I7 341 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 ARL14Q8N4G2 192 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 TRPV1Q8NER1 839 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR5L2Q8NGL0 311 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 ERMNQ8TAM6 284 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 AGR3Q8TD06 166 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 HCAR2Q8TDS4 363 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 SCFD1Q8WVM8 642 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 RASD2Q96D21 266 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 NRBF2Q96F24 287 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 SLC45A3Q96JT2 553 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 C9orf85Q96MD7 179 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 MTMR9Q96QG7 549 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 CCNL2Q96S94 520 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 UQCC2Q9BRT2 126 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 MCCC2Q9HCC0 563 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 AMBNQ9NP70 447 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 SLC17A5Q9NRA2 495 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 ELOVL2Q9NXB9 296 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 EHFQ9NZC4 300 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 IL36GQ9NZH8 169 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 WRAP73Q9P2S5 460 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 CTSZQ9UBR2 303 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZNF639Q9UID6 485 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 PRELID1Q9Y255 219 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 NTNG1Q9Y2I2 539 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 MRPL11Q9Y3B7 192 aaKnown RBP3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 USP16Q9Y5T5 823 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 MAD1L1Q9Y6D9 718 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 TTC41PQ6P2S7 1318 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 WDR19Q8NEZ3 1342 aa3.93□□□□□ -1.78
HMGB1P13-201ENST00000406019 TRAV6A0A075B6T7 132 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 ARHGEF35A5YM69 484 aa3.92□□□□□ -1.78
HMGB1P13-201ENST00000406019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms