RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 LPLP06858 475 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 TMEM52BQ4KMG9 183 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 DMRT3Q9NQL9 472 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 HAO2Q9NYQ3 351 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 DCDC2BA2VCK2 349 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 BMP4P12644 408 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 STT3AP46977 705 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 NOVA1P51513 510 aaKnown RBP13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 NKX3-2P78367 333 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 TMEM205Q6UW68 189 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 LRRC18Q8N456 261 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 LMNTD1Q8N9Z9 388 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 CD200R1Q8TD46 325 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 RHBDF1Q96CC6 855 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 MMP27Q9H306 513 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 MAB21L2Q9Y586 359 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 HPRP00739 348 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 ADAP00813 363 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 RAB3BP20337 219 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 AADACL4Q5VUY2 407 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 GPR39O43194 453 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 ZFAND5O76080 213 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 CSNK1A1P48729 337 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 KDELC1Q6UW63 502 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 RNF175Q8N4F7 328 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 POTEKPQ9BYX7 375 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 RGCCQ9H4X1 137 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 NMNAT1Q9HAN9 279 aaPredicted RBP13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 B3GNT2Q9NY97 397 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 PLEK2Q9NYT0 353 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 MTCH2Q9Y6C9 303 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 ANKRD31Q8N7Z5 1873 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 TVP23AA6NH52 213 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 HMX3A6NHT5 357 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 CTSCP53634 463 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 ADPRHP54922 357 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 CEACAM7Q14002 265 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 MINDY1Q8N5J2 469 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 OR4K3Q96R72 315 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 PRSS21Q9Y6M0 314 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 CSNK1G3Q9Y6M4 447 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 MAP2K3P46734 347 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF45Q02386 682 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 RPE65Q16518 533 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 CTC1Q2NKJ3 1217 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 OR7G3Q8NG95 312 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC45A3Q96JT2 553 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 GLSO94925 669 aaPredicted RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 NPR2P20594 1047 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 DAP3P51398 398 aaKnown RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 TGFBR3Q03167 851 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 SNTB2Q13425 540 aaKnown RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 LILRB2Q8N423 598 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 OR51Q1Q8NH59 317 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 S100PBPQ96BU1 408 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 L3HYPDHQ96EM0 354 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 MAGIXQ9H6Y5 334 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 EMC3Q9P0I2 261 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 TRAV18A0A075B6X5 111 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC1A7O00341 560 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 FUT1P19526 365 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 GABRR1P24046 479 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 POLR2HP52434 150 aaKnown RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 SPEM2Q0P670 501 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 STEAP4Q687X5 459 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF585AQ6P3V2 769 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 ENDOVQ8N8Q3 282 aaKnown RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 TCTN2Q96GX1 697 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 RHBDD3Q9Y3P4 386 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 CHRM4P08173 479 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 CCR5P51681 352 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 RNASE10Q5GAN6 216 aaKnown RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 HAGHLQ6PII5 290 aaPredicted RBP13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 ADAMTSL4Q6UY14 1074 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 ZADH2Q8N4Q0 377 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 KCND3Q9UK17 655 aa13.35□□□□□ -0.27
PCDHA11-201ENST00000398640 ANKRD34BA5PLL1 514 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 GOSR2O14653 212 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 TPPPO94811 219 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 DBHP09172 617 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 RGS6P49758 472 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 LTC4SQ16873 150 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 ACOT4Q8N9L9 421 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 DTWD2Q8NBA8 298 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 TANKQ92844 425 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 NGBQ9NPG2 151 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 GOLGA4Q13439 2230 aaKnown RBP13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 MEIS3P1A6NDR6 274 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 MPIG6BO95866 241 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 S100PP25815 95 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 CD34P28906 385 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 DCST2Q5T1A1 773 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 LCTLQ6UWM7 567 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms