RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 HTR1EP28566 365 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 OTX2P32243 289 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 VSX2P58304 361 aaPredicted RBP6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 IL5RAQ01344 420 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 RGS1Q08116 209 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 PDZK1IP1Q13113 114 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 DAG1Q14118 895 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 BOP1Q14137 746 aaKnown RBP6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF789Q5FWF6 425 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 COLEC12Q5KU26 742 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 CDCP2Q5VXM1 449 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 C3P1Q6ZMU1 363 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 ZC3H7AQ8IWR0 971 aaKnown RBP6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 C17orf78Q8N4C9 275 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 OR4M2Q8NGB6 313 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 OR56A4Q8NGH8 313 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 ITFG1Q8TB96 612 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 CXorf40AQ8TE69 158 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 CFHR4Q92496 578 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 MED8Q96G25 268 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 C3orf30Q96M34 536 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 RDH12Q96NR8 316 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 FEM1AQ9BSK4 669 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 UGT2B28Q9BY64 529 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 LRRC3Q9BY71 257 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 CHRDQ9H2X0 955 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 SMOC2Q9H3U7 446 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 TNFRSF12AQ9NP84 129 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 KLQ9UEF7 1012 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 PTRH2Q9Y3E5 179 aaKnown RBP6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 HEMK1Q9Y5R4 338 aaPredicted RBP6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 MYO9BQ13459 2157 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 TBC1D3KA0A087X1G2 549 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 MROH6A6NGR9 719 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 KRBOX1C9JBD0 128 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 M0R3G1 203 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 PTGESO14684 152 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 EEDO75530 441 aaKnown RBP6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 EFNA1P20827 205 aaPredicted RBP6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 PSEN2P49810 448 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 POLR2JP52435 117 aaKnown RBP6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 CDKN2DP55273 166 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 BNIP3Q12983 259 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 TDGQ13569 410 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF235Q14590 738 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 RBM48Q5RL73 367 aaKnown RBP6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 AGAP6Q5VW22 663 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 Q7L0L9 218 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 BOD1L2Q8IYS8 172 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 SMG8Q8ND04 991 aaKnown RBP6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 BLOC1S5Q8TDH9 187 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 TMEM125Q96AQ2 219 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 OTULINQ96BN8 352 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 AGAP4Q96P64 663 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 GAD1Q99259 594 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 TMEM208Q9BTX3 173 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 MED20Q9H944 212 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 SEMA4BQ9NPR2 832 aaPredicted RBP6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 DZANK1Q9NVP4 752 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 PCDHA9Q9Y5H5 950 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 NLRC5Q86WI3 1866 aa6.15□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A0A6YYC8 382 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 A0A1W2PQU0 124 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 I3L1I5 382 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 SIX3O95343 332 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 CLIC3O95833 236 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 TRAPPC2P0DI81 140 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 TRAPPC2BP0DI82 140 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ARSAP15289 507 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF37AP17032 561 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 UCP2P55851 309 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 RAP1BP61224 184 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 NFATC3Q12968 1075 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 OR8G1Q15617 311 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 NTRK2Q16620 822 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ATP6AP1LQ52LC2 224 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 CYBRD1Q53TN4 286 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 FGD3Q5JSP0 725 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ULK3Q6PHR2 472 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 TMPRSS11FQ6ZWK6 438 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 LDB1Q86U70 411 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 NOXA1Q86UR1 476 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ETFBKMTQ8IXQ9 262 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 HS3ST5Q8IZT8 346 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 KBTBD8Q8NFY9 601 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 OR8J3Q8NGG0 315 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 OR56B1Q8NGI3 324 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ZFAND1Q8TCF1 268 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 SAT2Q96F10 170 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 NEIL1Q96FI4 390 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 SUSD3Q96L08 255 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 MCUBQ9NWR8 336 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 C17orf102A2RUQ5 167 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 HHLA1C9JL84 531 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 C9JVG2 144 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 FXYD1O00168 92 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF264O43296 627 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF208O43345 1280 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 WIPF1O43516 503 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms