RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 CCDC85CA6NKD9 419 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 TSPAN4O14817 238 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 FCMRO60667 390 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 RFPL3O75679 317 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 FOSL1P15407 271 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 PYCR1P32322 319 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 HSD17B2P37059 387 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 TNFRSF4P43489 277 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 REEP5Q00765 189 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 ID2Q02363 134 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 ZNF433Q8N7K0 673 aaPredicted RBP10.1□□□□□ -0.79
BRF1-204ENST00000392557 OR51L1Q8NGJ5 315 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 TRMT10AQ8TBZ6 339 aaKnown RBP10.1□□□□□ -0.79
BRF1-204ENST00000392557 CACNG6Q9BXT2 260 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 DPAGT1Q9H3H5 408 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 PPP1R3EQ9H7J1 279 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 PELI2Q9HAT8 420 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 MAN2C1Q9NTJ4 1040 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 SLC7A7Q9UM01 511 aa10.1□□□□□ -0.79
BRF1-204ENST00000392557 PPIEQ9UNP9 301 aaKnown RBP10.1□□□□□ -0.79
BRF1-204ENST00000392557 A0A0B4J203 849 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 RGS9O75916 674 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 CSNK2A2P19784 350 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 CERS1P27544 350 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 PITPNBP48739 271 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 TSPAN31Q12999 210 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 LTB4RQ15722 352 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 C6orf132Q5T0Z8 1188 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 CCNJQ5T5M9 372 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 CREB3L2Q70SY1 520 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 CHMP1BQ7LBR1 199 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ZNF761Q86XN6 746 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 SLC38A6Q8IZM9 456 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 PATE1Q8WXA2 126 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 MRGPRX1Q96LB2 322 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 MENTQ9BUN1 341 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 FOLH1BQ9HBA9 442 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ZC4H2Q9NQZ6 224 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ATG4BQ9Y4P1 393 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 CACNG2Q9Y698 323 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 PRRC2CQ9Y520 2896 aaKnown RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 CIB4A0PJX0 185 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 TP53P04637 393 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 EIF4EP06730 217 aaKnown RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 GKN3PP0CG01 181 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ANXA3P12429 323 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 NDUFV2P19404 249 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 VSX2P58304 361 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 SFRP4Q6FHJ7 346 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 LYPD4Q6UWN0 246 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 SIRT6Q8N6T7 355 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 OR4Q3Q8NH05 313 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 APOBEC4Q8WW27 367 aaKnown RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 GSDMCQ9BYG8 508 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 TRIM36Q9NQ86 728 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 HINT3Q9NQE9 182 aaKnown RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 CHST2Q9Y4C5 530 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ATG2AQ2TAZ0 1938 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 TICRRQ7Z2Z1 1910 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 MAGEB4O15481 346 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 RNF13O43567 381 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 MT-ND4P03905 459 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 FCER2P06734 321 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ATF4P18848 351 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 MPIP34949 423 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 TRHRP34981 398 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ZNF793Q6ZN11 406 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 SHISA5Q8N114 240 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ZNF655Q8N720 491 aaPredicted RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 MORN4Q8NDC4 146 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 GRHL3Q8TE85 626 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 SLC41A3Q96GZ6 507 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 TIMM29Q9BSF4 260 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 MED18Q9BUE0 208 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 RNF32Q9H0A6 362 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 S1PR5Q9H228 398 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 SRMSQ9H3Y6 488 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 SLC6A20Q9NP91 592 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 ADAP2Q9NPF8 381 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 SLC17A4Q9Y2C5 497 aa10.09□□□□□ -0.79
BRF1-204ENST00000392557 SF3B6Q9Y3B4 125 aaKnown RBP10.09□□□□□ -0.79
BRF1-204ENST00000392557 NPIPA5A0A0B4J1W7 369 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 HNRNPCL2B2RXH8 293 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 NPIPA7E9PJI5 369 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 H3BSH0 61 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 NPIPA8P0DM63 369 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 POLR2CP19387 275 aaPredicted RBP10.08□□□□□ -0.8
BRF1-204ENST00000392557 DNASE1P24855 282 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 PGGHGQ32M88 737 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 ESCO2Q56NI9 601 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 ZNF322Q6U7Q0 402 aaPredicted RBP10.08□□□□□ -0.8
BRF1-204ENST00000392557 SFTPA2Q8IWL1 248 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 TMEFF1Q8IYR6 380 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 CDK20Q8IZL9 346 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 NATD1Q8N6N6 113 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 KCT2Q8NC54 265 aa10.08□□□□□ -0.8
BRF1-204ENST00000392557 OR2L3Q8NG85 312 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms