RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 DUSP7Q16829 419 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 GDF7Q7Z4P5 450 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CPXM2Q8N436 756 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 MEMO1Q9Y316 297 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 TVP23AA6NH52 213 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 FABP7O15540 132 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 KCNK2O95069 426 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 PBX2P40425 430 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 LRRC26Q2I0M4 334 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 FIGLAQ6QHK4 219 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 USP51Q70EK9 711 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CD300LFQ8TDQ1 290 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 DNMT3BQ9UBC3 853 aaKnown RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 RBM7Q9Y580 266 aaKnown RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ANKRD33BA6NCL7 494 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 HIDE1A8MVS5 230 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 KAT7O95251 611 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 TRIM23P36406 574 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SOX9P48436 509 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 BEX5Q5H9J7 111 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 OR4M1Q8NGD0 313 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 GLIPR2Q9H4G4 154 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF701Q9NV72 531 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 TMEFF2Q9UIK5 374 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 GATBO75879 557 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLCO2B1O94956 709 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF806P0C7X5 589 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ATP5A1P25705 553 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF41P51814 821 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 MRPL2Q5T653 305 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SIAH3Q8IW03 269 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLC39A11Q8N1S5 342 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 LRIG1Q96JA1 1093 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 OPALINQ96PE5 141 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 C1QTNF2Q9BXJ5 285 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 METTL17Q9H7H0 456 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 POT1Q9NUX5 634 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 NDUFB11Q9NX14 153 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 DIMT1Q9UNQ2 313 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 COPS3Q9UNS2 423 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 TRAV18A0A075B6X5 111 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 H3BNC9 293 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 CASC3O15234 703 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 VNN2O95498 520 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 MAOBP27338 520 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLC1A3P43003 542 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 RPS5P46782 204 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ELOAQ14241 798 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SPIN3Q5JUX0 258 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 CST9Q5W186 159 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 FAM83HQ6ZRV2 1179 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 NANOGP1Q8N7R0 232 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 TM9SF4Q92544 642 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 HAVCR1Q96D42 359 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM221A6NGB7 291 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLC9B1P1A6NJY1 282 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 UGT2B7P16662 529 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 OR10A3P58181 314 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SAXO2Q658L1 398 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 PYHIN1Q6K0P9 492 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 PRSS45Q7RTY3 260 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SIMC1Q8NDZ2 872 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 PKMYT1Q99640 499 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLC17A9Q9BYT1 436 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ACTR6Q9GZN1 396 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 NOX3Q9HBY0 568 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 RCE1Q9Y256 329 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 MAP1BP46821 2468 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF726A6NNF4 738 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 CYB5AP00167 134 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 EIF4EP06730 217 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ELK1P19419 428 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 FRKP42685 505 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLC7A9P82251 487 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 REEP5Q00765 189 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF33BQ06732 778 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 FCN2Q15485 313 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLC22A10Q63ZE4 541 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 FAM71E1Q6IPT2 247 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 PLCZ1Q86YW0 608 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 NEURL3Q96EH8 262 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 WDR92Q96MX6 357 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 C1QTNF3Q9BXJ4 246 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 MKRN2Q9H000 416 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SPATA6Q9NWH7 488 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ASB4Q9Y574 426 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 NUP214P35658 2090 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 AKR7A2O43488 359 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 CTSAP10619 480 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 PCMT1P22061 227 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 RBM34P42696 430 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 RAE1P78406 368 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 FAM76BQ5HYJ3 339 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 C3orf38Q5JPI3 329 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 FAM26DQ5JW98 314 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM31Q5JXX7 168 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 AWAT2Q6E213 333 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ZER1Q7Z7L7 766 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SPAG16Q8N0X2 631 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SLAMF7Q9NQ25 335 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms