RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 GPR75O95800 540 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 STT3AP46977 705 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SENP5Q96HI0 755 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-202ENST00000355480 LHPPQ9H008 270 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 DCAF13Q9NV06 445 aaKnown RBP16.91■□□□□ 0.3
COL18A1-202ENST00000355480 HAO2Q9NYQ3 351 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SIT1Q9Y3P8 196 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 CPOXP36551 454 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 ETV5P41161 510 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 CSNK1EP49674 416 aaKnown RBP16.91■□□□□ 0.3
COL18A1-202ENST00000355480 AKR1C8PQ5T2L2 129 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 PLCXD3Q63HM9 321 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 OR5L1Q8NGL2 311 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 ADAMTS19Q8TE59 1207 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 TCTN2Q96GX1 697 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 AP1S3Q96PC3 154 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 FAIMQ9NVQ4 179 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 KLHL42Q9P2K6 505 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF337Q9Y3M9 751 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 USP3Q9Y6I4 520 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF14P17017 642 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-202ENST00000355480 RAB31Q13636 194 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 DCAF12Q5T6F0 453 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 VRK2Q86Y07 508 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 PAPD5Q8NDF8 572 aaKnown RBP16.91■□□□□ 0.3
COL18A1-202ENST00000355480 OR1S1Q8NH92 325 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 ASB11Q8WXH4 323 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 DCBLD2Q96PD2 775 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 HSFX1Q9UBD0 423 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 DNAJB6O75190 326 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 ACPPP15309 386 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 GPX3P22352 226 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SLC14A2Q15849 920 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 CTSL3PQ5NE16 218 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SGPP2Q8IWX5 399 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 OR13J1Q8NGT2 312 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 FOXN4Q96NZ1 517 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 C1QTNF2Q9BXJ5 285 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 ZFP57Q9NU63 452 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 TCHHQ07283 1943 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 IL32P24001 234 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 NOVP48745 357 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 MS4A2Q01362 244 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 GK3PQ14409 553 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 C9orf135Q5VTT2 229 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 ARFGAP1Q8N6T3 406 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 ASCC1Q8N9N2 400 aaKnown RBP16.9■□□□□ 0.3
COL18A1-202ENST00000355480 IL17RDQ8NFM7 739 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 OR5D14Q8NGL3 314 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF587Q96SQ5 575 aaPredicted RBP16.9■□□□□ 0.3
COL18A1-202ENST00000355480 LHX3Q9UBR4 397 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 H0YGG7 62 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 GYPBP06028 91 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 ENTPD8Q5MY95 495 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 OR51Q1Q8NH59 317 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 TMEM246Q9BRR3 403 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 SAP130Q9H0E3 1048 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 OBP2BQ9NPH6 170 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 GPR160Q9UJ42 338 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 CDK5R2Q13319 367 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 RAB3DO95716 219 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 IGHG1P01857 330 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 CXCR4P61073 352 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 MAT1AQ00266 395 aaKnown RBP16.9■□□□□ 0.3
COL18A1-202ENST00000355480 TMEM31Q5JXX7 168 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 MMP21Q8N119 569 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 OR5K2Q8NHB8 316 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 ACOT11Q8WXI4 607 aaPredicted RBP16.9■□□□□ 0.3
COL18A1-202ENST00000355480 MSANTD3Q96H12 275 aa16.9■□□□□ 0.3
COL18A1-202ENST00000355480 POU3F1Q03052 451 aaPredicted RBP16.89■□□□□ 0.3
COL18A1-202ENST00000355480 PRDX1Q06830 199 aaKnown RBP16.89■□□□□ 0.3
COL18A1-202ENST00000355480 TMEM244Q5VVB8 128 aa16.89■□□□□ 0.3
COL18A1-202ENST00000355480 KIAA1211LQ6NV74 962 aa16.89■□□□□ 0.3
COL18A1-202ENST00000355480 ITFG2Q969R8 447 aa16.89■□□□□ 0.3
COL18A1-202ENST00000355480 SLC30A3Q99726 388 aa16.89■□□□□ 0.3
COL18A1-202ENST00000355480 ULBP2Q9BZM5 246 aa16.89■□□□□ 0.3
COL18A1-202ENST00000355480 DDX31Q9H8H2 851 aaKnown RBP16.89■□□□□ 0.3
COL18A1-202ENST00000355480 PAQR5Q9NXK6 330 aaPredicted RBP16.89■□□□□ 0.3
COL18A1-202ENST00000355480 SIGLEC6O43699 453 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 ARSBP15848 533 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 ERVFC1P60507 584 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 RAB4BP61018 213 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 SEC61A1P61619 476 aaKnown RBP16.89■□□□□ 0.29
COL18A1-202ENST00000355480 DCAF7P61962 342 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 YPEL5P62699 121 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 KEAP1Q14145 624 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 RNF175Q8N4F7 328 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 ARRDC2Q8TBH0 407 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 SPIN2AQ99865 258 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 SPIN2BQ9BPZ2 258 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 OR52D1Q9H346 318 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 MT-CO2P00403 227 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 CAPNS1P04632 268 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 UGT2B7P16662 529 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 BCL2A1Q16548 175 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 NUDT22Q9BRQ3 303 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 TMEM181Q9P2C4 612 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 SRPX2O60687 465 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-202ENST00000355480 GALR3O60755 368 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms