RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 PHF11Q9UIL8 331 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 STX11O75558 287 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 PAHP00439 452 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 SNAP47Q5SQN1 464 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 SYCE2Q6PIF2 218 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 MEPCEQ7L2J0 689 aaKnown RBP18.15■□□□□ 0.5
COL13A1-201ENST00000354547 OR51L1Q8NGJ5 315 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 PHOSPHO2Q8TCD6 241 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 KRCC1Q9NPI7 259 aaPredicted RBP18.15■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF542PQ5EBM4 170 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF438Q7Z4V0 828 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 YIPF7Q8N8F6 280 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 PTP4A1Q93096 173 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 UPRTQ96BW1 309 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 BPIFA2Q96DR5 249 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 SERINC2Q96SA4 455 aa18.15■□□□□ 0.5
COL13A1-201ENST00000354547 RBFOX1Q9NWB1 397 aaKnown RBP18.15■□□□□ 0.5
COL13A1-201ENST00000354547 RGS13O14921 159 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 RGS9O75916 674 aaPredicted RBP18.14■□□□□ 0.49
COL13A1-201ENST00000354547 HOXB2P14652 356 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 DUSP8Q13202 625 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 GPR18Q14330 331 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 PRPF38BQ5VTL8 546 aaKnown RBP18.14■□□□□ 0.49
COL13A1-201ENST00000354547 MZT2BQ6NZ67 158 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 ZNF619Q8N2I2 560 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 SAMD12Q8N8I0 201 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 OR13C5Q8NGS8 318 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 OR5W2Q8NH69 310 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 RIPOR3Q96MK2 946 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 MED17Q9NVC6 651 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 KLF15Q9UIH9 416 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 PRR23D1E9PI22 279 aaPredicted RBP18.14■□□□□ 0.49
COL13A1-201ENST00000354547 LANCL1O43813 399 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 CPNE3O75131 537 aaKnown RBP18.14■□□□□ 0.49
COL13A1-201ENST00000354547 RFPL3O75679 317 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 CT62P0C5K7 136 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 PRR23D2P0DMB1 279 aaPredicted RBP18.14■□□□□ 0.49
COL13A1-201ENST00000354547 PBX2P40425 430 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 FOXK2Q01167 660 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 FCRL6Q6DN72 434 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 SYT9Q86SS6 491 aa18.14■□□□□ 0.49
COL13A1-201ENST00000354547 H0YGG7 62 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 PLOD3O60568 738 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 KLF8O95600 359 aaPredicted RBP18.13■□□□□ 0.49
COL13A1-201ENST00000354547 PPP1R3DO95685 299 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 ACSL1P33121 698 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 ARF3P61204 181 aaPredicted RBP18.13■□□□□ 0.49
COL13A1-201ENST00000354547 TMEM44Q2T9K0 475 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 EIPR1Q53HC9 387 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 SDE2Q6IQ49 451 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 KIAA1324Q6UXG2 1013 aaKnown RBP18.13■□□□□ 0.49
COL13A1-201ENST00000354547 CDK20Q8IZL9 346 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 LILRB4Q8NHJ6 448 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 FAM3CQ92520 227 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 KIAA1143Q96AT1 154 aaPredicted RBP18.13■□□□□ 0.49
COL13A1-201ENST00000354547 TMEM43Q9BTV4 400 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 PIGUQ9H490 435 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 SLC22A7Q9Y694 548 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 BHLHE40O14503 412 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 HCN1O60741 890 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 NTSR1P30989 418 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 OR12D2P58182 307 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 ARL14Q8N4G2 192 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 C17orf47Q8NEP4 570 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 SIPA1Q96FS4 1042 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 C4orf36Q96KX1 117 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 TIMP4Q99727 224 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 RASD1Q9Y272 281 aa18.13■□□□□ 0.49
COL13A1-201ENST00000354547 AGR2O95994 175 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 POU2F2P09086 479 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 SNRPD2P62316 118 aaKnown RBP18.12■□□□□ 0.49
COL13A1-201ENST00000354547 ENPP2Q13822 863 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 CRMP1Q14194 572 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 DEFB110Q30KQ9 67 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 KRT74Q7RTS7 529 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 CEACAM19Q7Z692 300 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 GID4Q8IVV7 300 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 CNOT9Q92600 299 aaKnown RBP18.12■□□□□ 0.49
COL13A1-201ENST00000354547 RERGQ96A58 199 aaPredicted RBP18.12■□□□□ 0.49
COL13A1-201ENST00000354547 TEAD3Q99594 435 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 ZNF350Q9GZX5 532 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 TRPV4Q9HBA0 871 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 GALNT9Q9HCQ5 603 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 OBP2AQ9NY56 170 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 ACTR10Q9NZ32 417 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 FAM86C2PA6NEL3 165 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 YES1P07947 543 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 NID1P14543 1247 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 ALAS2P22557 587 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 BMP8BP34820 402 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 PPP1CAP62136 330 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 C9orf50Q5SZB4 431 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 BMP8AQ7Z5Y6 402 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 SOSTQ9BQB4 213 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 CCDC86Q9H6F5 360 aaKnown RBP18.12■□□□□ 0.49
COL13A1-201ENST00000354547 MEPEQ9NQ76 525 aaPredicted RBP18.12■□□□□ 0.49
COL13A1-201ENST00000354547 ENAMQ9NRM1 1142 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 ASB6Q9NWX5 421 aa18.12■□□□□ 0.49
COL13A1-201ENST00000354547 ZNF223Q9UK11 482 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms