RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RFPL3O75679 317 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 APOL3O95236 402 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC2A10O95528 541 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SCG5P05408 212 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HBQ1P09105 142 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FBLP22087 321 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OPRL1P41146 370 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SERPINB10P48595 397 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 EFNA3P52797 238 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RAB40BQ12829 278 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SSX1Q16384 188 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZSWIM7Q19AV6 140 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ALG10BQ5I7T1 473 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 C19orf48Q6RUI8 117 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZNF550Q7Z398 422 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 KANSL1Q7Z3B3 1105 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ATCAYQ86WG3 371 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 EFHD2Q96C19 240 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RNFT2Q96EX2 444 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HS6ST2Q96MM7 605 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 DPYSL5Q9BPU6 564 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CHCHD6Q9BRQ6 235 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 DUSP23Q9BVJ7 150 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLIRPQ9GZT3 109 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MED17Q9NVC6 651 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PILRBQ9UKJ0 227 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ATXN7L1Q9ULK2 861 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMEM5Q9Y2B1 443 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PCDHGA3Q9Y5H0 932 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FER1L5A0AVI2 2057 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 DMDP11532 3685 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ASCC3Q8N3C0 2202 aaKnown RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HEATR5AQ86XA9 2040 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 A0A1B0GX78 115 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CPED1A4D0V7 1026 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SERINC4A6NH21 518 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MYL12BO14950 172 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 DYRK3O43781 588 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CSTAP01040 98 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HMGN1P05114 100 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SAGP10523 405 aaPredicted RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TBXA2RP21731 343 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 UGT2B10P36537 528 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ETV5P41161 510 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SOX3P41225 446 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ETV1P50549 477 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LIMK1P53667 647 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CDH11P55287 796 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TUBA1BP68363 451 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NDUFAF6Q330K2 333 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ANKDD1AQ495B1 522 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ARHGAP40Q5TG30 622 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 AADACL4Q5VUY2 407 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TUBA1AQ71U36 451 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 BMP8AQ7Z5Y6 402 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CMIPQ8IY22 773 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CADM2Q8N3J6 435 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FNDC8Q8TC99 324 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC35B4Q969S0 331 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 VMP1Q96GC9 406 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SH3YL1Q96HL8 342 aaPredicted RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CENPOQ9BU64 300 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZNF426Q9BUY5 554 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ENKD1Q9H0I2 346 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RNF167Q9H6Y7 350 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CARD8Q9Y2G2 431 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 A0A1B0GTQ1 180 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SYNDIG1LA6NDD5 238 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 J3QRK9 145 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 POLR1CO15160 346 aaPredicted RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 BMP7P18075 431 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CTBP2P56545 445 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 C1DQ13901 141 aaKnown RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 C3orf38Q5JPI3 329 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 GUSBP11Q6P575 273 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMEM71Q6P5X7 295 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZNF574Q6ZN55 896 aaPredicted RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 USP43Q70EL4 1123 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 WDR5BQ86VZ2 330 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PRSS58Q8IYP2 241 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR52L1Q8NGH7 329 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR13C2Q8NGS9 318 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MAFAQ8NHW3 353 aaPredicted RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC2A12Q8TD20 617 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SAP25Q8TEE9 199 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RFKQ969G6 155 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RNF31Q96EP0 1072 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC46A1Q96NT5 459 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NXF5Q9H1B4 397 aaKnown RBP13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SIGLEC7Q9Y286 467 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CORINQ9Y5Q5 1042 aa13□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZDBF2Q9HCK1 2354 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 IRGMA1A4Y4 181 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RCBTB2O95199 551 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 DDAH2O95865 285 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 IGKV3-11P04433 115 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NGFRP08138 427 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms