RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 FAM25CB3EWG5 89 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 FAM25GB3EWG6 89 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 APBB3O95704 486 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 SAGP10523 405 aaPredicted RBP21.67■■□□□ 1.06
NDEL1-201ENST00000334527 PRKAR1AP10644 381 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 SLC16A1P53985 500 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 RPS7P62081 194 aaKnown RBP21.67■■□□□ 1.06
NDEL1-201ENST00000334527 FOXK2Q01167 660 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 C9orf50Q5SZB4 431 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 NR2C2APQ86WQ0 139 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 SLC37A3Q8NCC5 494 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 FYTTD1Q96QD9 318 aaKnown RBP21.67■■□□□ 1.06
NDEL1-201ENST00000334527 STACQ99469 402 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 TMEM43Q9BTV4 400 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 BEX2Q9BXY8 128 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 FBRSQ9HAH7 460 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 RBFOX1Q9NWB1 397 aaKnown RBP21.67■■□□□ 1.06
NDEL1-201ENST00000334527 TICRRQ7Z2Z1 1910 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 DNAH14Q0VDD8 3507 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 PRR23D1E9PI22 279 aaPredicted RBP21.67■■□□□ 1.06
NDEL1-201ENST00000334527 HRO43593 1189 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 SLC19A2O60779 497 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 PRR23D2P0DMB1 279 aaPredicted RBP21.67■■□□□ 1.06
NDEL1-201ENST00000334527 MLLT3P42568 568 aaPredicted RBP21.67■■□□□ 1.06
NDEL1-201ENST00000334527 IDNKQ5T6J7 187 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 GARNL3Q5VVW2 1013 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 FCRLBQ6BAA4 426 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 PTP4A1Q93096 173 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 TWSG1Q9GZX9 223 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 TRIM36Q9NQ86 728 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 CMC2Q9NRP2 79 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 MED31Q9Y3C7 131 aa21.67■■□□□ 1.06
NDEL1-201ENST00000334527 RANBP2P49792 3224 aaKnown RBP21.66■■□□□ 1.06
NDEL1-201ENST00000334527 GXYLT2A0PJZ3 443 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 FMO6PO60774 539 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 GPR75O95800 540 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 EGFP01133 1207 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 CHRNB1P11230 501 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 BMP8BP34820 402 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 GABRA3P34903 492 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 PBX2P40425 430 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 MTNR1BP49286 362 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 CTBP2P56545 445 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 RIN1Q13671 783 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 GALEQ14376 348 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 PRICKLE4Q2TBC4 344 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 AMZ1Q400G9 498 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 RPL13AP3Q6NVV1 102 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 BMP8AQ7Z5Y6 402 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 UBE2Q1Q7Z7E8 422 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 ZC3HAV1LQ96H79 300 aaKnown RBP21.66■■□□□ 1.06
NDEL1-201ENST00000334527 OR51V1Q9H2C8 321 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 MAT2BQ9NZL9 334 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 FANCMQ8IYD8 2048 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 CYR61O00622 381 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 LYRM1O43325 122 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 MRPL3P09001 348 aaKnown RBP21.66■■□□□ 1.06
NDEL1-201ENST00000334527 CT62P0C5K7 136 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 EN2P19622 333 aaPredicted RBP21.66■■□□□ 1.06
NDEL1-201ENST00000334527 ACSL1P33121 698 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 SRP54P61011 504 aaKnown RBP21.66■■□□□ 1.06
NDEL1-201ENST00000334527 CD83Q01151 205 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 CDK10Q15131 360 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 TMPRSS11FQ6ZWK6 438 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 OR5W2Q8NH69 310 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 GRHL3Q8TE85 626 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 PBX4Q9BYU1 374 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 IL21RQ9HBE5 538 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 CAPN10Q9HC96 672 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 EVA1BQ9NVM1 165 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 SCML1Q9UN30 329 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 SIGLEC7Q9Y286 467 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 TMEM5Q9Y2B1 443 aa21.66■■□□□ 1.06
NDEL1-201ENST00000334527 TRAV27A0A087WT01 109 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 ELK1P19419 428 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 LSSP48449 732 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 INPP1P49441 399 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 POU6F2P78424 691 aaPredicted RBP21.65■■□□□ 1.06
NDEL1-201ENST00000334527 TATDN3Q17R31 274 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 PATE1Q8WXA2 126 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 ACOT12Q8WYK0 555 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 TEAD3Q99594 435 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 CDCA3Q99618 268 aaPredicted RBP21.65■■□□□ 1.06
NDEL1-201ENST00000334527 BOLA1Q9Y3E2 137 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 SLC22A31A6NKX4 558 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 A6NL46 340 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 BRINP1O60477 761 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 HNRNPA2B1P22626 353 aaKnown RBP21.65■■□□□ 1.06
NDEL1-201ENST00000334527 RFX3P48380 749 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 PLAURQ03405 335 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 CSTF1Q05048 431 aaKnown RBP21.65■■□□□ 1.06
NDEL1-201ENST00000334527 ALG11Q2TAA5 492 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 ZCCHC12Q6PEW1 402 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 ARL9Q6T311 187 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 ZAR1Q86SH2 424 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 OR51A7Q8NH64 312 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 MEPEQ9NQ76 525 aaPredicted RBP21.65■■□□□ 1.06
NDEL1-201ENST00000334527 PAQR5Q9NXK6 330 aaPredicted RBP21.65■■□□□ 1.06
NDEL1-201ENST00000334527 NLKQ9UBE8 527 aa21.65■■□□□ 1.06
NDEL1-201ENST00000334527 CLCA3PQ9Y6N3 262 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms