RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MPIP34949 423 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 PTGS2P35354 604 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 MMP15P51511 669 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 TTTY10Q9BZA0 68 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 C6orf106Q9H6K1 298 aaPredicted RBP21.94■■□□□ 1.1
TSKU-201ENST00000333090 BRD7Q9NPI1 651 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 SCP2D1Q9UJQ7 156 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 CARNS1A5YM72 827 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 SYNDIG1LA6NDD5 238 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 A8MUA0 341 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 HPXP02790 462 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 SLC35G4P0C7Q5 338 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 TEAD1P28347 426 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 NTHL1P78549 312 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 SUZ12Q15022 739 aaKnown RBP21.94■■□□□ 1.1
TSKU-201ENST00000333090 CNKSR3Q6P9H4 555 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 BTN2A1Q7KYR7 527 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 LRRTM4Q86VH4 590 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 SLC16A11Q8NCK7 471 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 GALNT11Q8NCW6 608 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 MS4A6EQ96DS6 147 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 SLC35A4Q96G79 324 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 RBCK1Q9BYM8 510 aa21.94■■□□□ 1.1
TSKU-201ENST00000333090 METTL17Q9H7H0 456 aaPredicted RBP21.94■■□□□ 1.1
TSKU-201ENST00000333090 KRCC1Q9NPI7 259 aaPredicted RBP21.94■■□□□ 1.1
TSKU-201ENST00000333090 ZNF443Q9Y2A4 671 aaPredicted RBP21.94■■□□□ 1.1
TSKU-201ENST00000333090 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.94■■□□□ 1.1
TSKU-201ENST00000333090 LRRN3E7EW58 273 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 FGF18O76093 207 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 ATF1P18846 271 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 ZP1P60852 638 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PRDX1Q06830 199 aaKnown RBP21.93■■□□□ 1.1
TSKU-201ENST00000333090 MESP2Q0VG99 397 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PUS10Q3MIT2 529 aaKnown RBP21.93■■□□□ 1.1
TSKU-201ENST00000333090 SLC48A1Q6P1K1 146 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 FGD2Q7Z6J4 655 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PXKQ7Z7A4 578 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 GPALPP1Q8IXQ4 340 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 IZUMO1Q8IYV9 350 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 FTMTQ8N4E7 242 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PTP4A1Q93096 173 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 FERD3LQ96RJ6 166 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 CD180Q99467 661 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 LGR4Q9BXB1 951 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 LRRN3Q9H3W5 708 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 SIDT1Q9NXL6 827 aaKnown RBP21.93■■□□□ 1.1
TSKU-201ENST00000333090 PPIEQ9UNP9 301 aaKnown RBP21.93■■□□□ 1.1
TSKU-201ENST00000333090 TRABD2BA6NFA1 517 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 FKTNO75072 461 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 ATP5A1P25705 553 aaKnown RBP21.93■■□□□ 1.1
TSKU-201ENST00000333090 PYCR1P32322 319 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 SELENOPP49908 381 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 TMEM35AQ53FP2 167 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 TJAP1Q5JTD0 557 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 METRNLQ641Q3 311 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 ZNF527Q8NB42 609 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 OR51Q1Q8NH59 317 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PFN4Q8NHR9 129 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 GHSRQ92847 366 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PGLYRP3Q96LB9 341 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 TEAD3Q99594 435 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 ORAI3Q9BRQ5 295 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 C12orf10Q9HB07 376 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PRDM7Q9NQW5 492 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 C20orf141Q9NUB4 165 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 MRPL15Q9P015 296 aaKnown RBP21.93■■□□□ 1.1
TSKU-201ENST00000333090 RNF215Q9Y6U7 377 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 HIDE1A8MVS5 230 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 BHLHE40O14503 412 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 RRASP10301 218 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 CLUP10909 449 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 PITPNAQ00169 270 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 TRAM1Q15629 374 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 ABHD17CQ6PCB6 329 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 LILRA6Q6PI73 481 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 FRRS1Q6ZNA5 592 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 BRIX1Q8TDN6 353 aaKnown RBP21.93■■□□□ 1.1
TSKU-201ENST00000333090 ACTRT3Q9BYD9 372 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 FN3KQ9H479 309 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 AUNIPQ9H7T9 357 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 MAB21L2Q9Y586 359 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 EYSQ5T1H1 3165 aa21.93■■□□□ 1.1
TSKU-201ENST00000333090 CDHR4A6H8M9 788 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 PRR23D1E9PI22 279 aaPredicted RBP21.92■■□□□ 1.1
TSKU-201ENST00000333090 M0R233 179 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 CXCL14O95715 111 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 HRGP04196 525 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 PRR23D2P0DMB1 279 aaPredicted RBP21.92■■□□□ 1.1
TSKU-201ENST00000333090 F3P13726 295 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 MAKP20794 623 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 NOS3P29474 1203 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 OR5J2Q8NH18 312 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 OR56B4Q8NH76 319 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 CDS1Q92903 461 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 IFT27Q9BW83 186 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 ZNF436Q9C0F3 470 aaPredicted RBP21.92■■□□□ 1.1
TSKU-201ENST00000333090 CES1P1Q9UKY3 287 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 ANTXRLA6NF34 631 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 SC5DO75845 299 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 PCCBP05166 539 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms